RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 UBASH3AP57075 661 aa23.12■■□□□ 1.29
SMARCD2-206ENST00000577990 SLC6A3Q01959 620 aa23.12■■□□□ 1.29
SMARCD2-206ENST00000577990 CSTF1Q05048 431 aaKnown RBP23.12■■□□□ 1.29
SMARCD2-206ENST00000577990 FBXO43Q4G163 708 aa23.12■■□□□ 1.29
SMARCD2-206ENST00000577990 SYPL2Q5VXT5 272 aa23.12■■□□□ 1.29
SMARCD2-206ENST00000577990 NAA35Q5VZE5 725 aa23.12■■□□□ 1.29
SMARCD2-206ENST00000577990 TSSK4Q6SA08 328 aa23.12■■□□□ 1.29
SMARCD2-206ENST00000577990 MAMSTRQ6ZN01 415 aa23.12■■□□□ 1.29
SMARCD2-206ENST00000577990 TAC4Q86UU9 113 aa23.12■■□□□ 1.29
SMARCD2-206ENST00000577990 ETFBKMTQ8IXQ9 262 aa23.12■■□□□ 1.29
SMARCD2-206ENST00000577990 MSANTD4Q8NCY6 345 aa23.12■■□□□ 1.29
SMARCD2-206ENST00000577990 BAP1Q92560 729 aa23.12■■□□□ 1.29
SMARCD2-206ENST00000577990 SLC2A13Q96QE2 648 aa23.12■■□□□ 1.29
SMARCD2-206ENST00000577990 PNKPQ96T60 521 aa23.12■■□□□ 1.29
SMARCD2-206ENST00000577990 BBS2Q9BXC9 721 aa23.12■■□□□ 1.29
SMARCD2-206ENST00000577990 WDR35Q9P2L0 1181 aa23.12■■□□□ 1.29
SMARCD2-206ENST00000577990 DMXL1Q9Y485 3027 aa23.12■■□□□ 1.29
SMARCD2-206ENST00000577990 KIAA1549LQ6ZVL6 1849 aa23.12■■□□□ 1.29
SMARCD2-206ENST00000577990 NEDD8-MDP1E9PL57 170 aa23.11■■□□□ 1.29
SMARCD2-206ENST00000577990 LATS1O95835 1130 aa23.11■■□□□ 1.29
SMARCD2-206ENST00000577990 CYP1A1P04798 512 aaPredicted RBP23.11■■□□□ 1.29
SMARCD2-206ENST00000577990 CCDC172P0C7W6 258 aa23.11■■□□□ 1.29
SMARCD2-206ENST00000577990 FERP16591 822 aa23.11■■□□□ 1.29
SMARCD2-206ENST00000577990 TBX4P57082 545 aa23.11■■□□□ 1.29
SMARCD2-206ENST00000577990 RING1Q06587 406 aa23.11■■□□□ 1.29
SMARCD2-206ENST00000577990 NNTQ13423 1086 aa23.11■■□□□ 1.29
SMARCD2-206ENST00000577990 NUGGCQ68CJ6 796 aa23.11■■□□□ 1.29
SMARCD2-206ENST00000577990 TRIM72Q6ZMU5 477 aa23.11■■□□□ 1.29
SMARCD2-206ENST00000577990 SLC26A9Q7LBE3 791 aa23.11■■□□□ 1.29
SMARCD2-206ENST00000577990 FAM217AQ8IXS0 508 aa23.11■■□□□ 1.29
SMARCD2-206ENST00000577990 CPXM2Q8N436 756 aa23.11■■□□□ 1.29
SMARCD2-206ENST00000577990 SPEM1Q8N4L4 309 aa23.11■■□□□ 1.29
SMARCD2-206ENST00000577990 NAT16Q8N8M0 369 aa23.11■■□□□ 1.29
SMARCD2-206ENST00000577990 CPA5Q8WXQ8 436 aa23.11■■□□□ 1.29
SMARCD2-206ENST00000577990 EZH1Q92800 747 aaPredicted RBP23.11■■□□□ 1.29
SMARCD2-206ENST00000577990 C18orf8Q96DM3 657 aa23.11■■□□□ 1.29
SMARCD2-206ENST00000577990 PRMT8Q9NR22 394 aaPredicted RBP23.11■■□□□ 1.29
SMARCD2-206ENST00000577990 FAM170AA1A519 330 aa23.1■■□□□ 1.29
SMARCD2-206ENST00000577990 RNF40O75150 1001 aa23.1■■□□□ 1.29
SMARCD2-206ENST00000577990 TULP3O75386 442 aa23.1■■□□□ 1.29
SMARCD2-206ENST00000577990 GRAP2O75791 330 aa23.1■■□□□ 1.29
SMARCD2-206ENST00000577990 APODP05090 189 aa23.1■■□□□ 1.29
SMARCD2-206ENST00000577990 TYRP14679 529 aa23.1■■□□□ 1.29
SMARCD2-206ENST00000577990 CCR3P51677 355 aa23.1■■□□□ 1.29
SMARCD2-206ENST00000577990 KDSRQ06136 332 aa23.1■■□□□ 1.29
SMARCD2-206ENST00000577990 DCAF6Q58WW2 860 aa23.1■■□□□ 1.29
SMARCD2-206ENST00000577990 ZC3H14Q6PJT7 736 aaKnown RBP23.1■■□□□ 1.29
SMARCD2-206ENST00000577990 UNC45BQ8IWX7 931 aa23.1■■□□□ 1.29
SMARCD2-206ENST00000577990 DEFB106AQ8N104 65 aa23.1■■□□□ 1.29
SMARCD2-206ENST00000577990 ZNF397Q8NF99 534 aaPredicted RBP23.1■■□□□ 1.29
SMARCD2-206ENST00000577990 ADAM32Q8TC27 787 aa23.1■■□□□ 1.29
SMARCD2-206ENST00000577990 XPO6Q96QU8 1125 aaKnown RBP23.1■■□□□ 1.29
SMARCD2-206ENST00000577990 ARHGEF4Q9NR80 690 aa23.1■■□□□ 1.29
SMARCD2-206ENST00000577990 FBXO4Q9UKT5 387 aa23.1■■□□□ 1.29
SMARCD2-206ENST00000577990 TLR6Q9Y2C9 796 aa23.1■■□□□ 1.29
SMARCD2-206ENST00000577990 ATG2BQ96BY7 2078 aa23.1■■□□□ 1.29
SMARCD2-206ENST00000577990 CACNG3O60359 315 aa23.09■■□□□ 1.29
SMARCD2-206ENST00000577990 DAB1O75553 588 aa23.09■■□□□ 1.29
SMARCD2-206ENST00000577990 KAT7O95251 611 aa23.09■■□□□ 1.29
SMARCD2-206ENST00000577990 TRUB2O95900 331 aaKnown RBP23.09■■□□□ 1.29
SMARCD2-206ENST00000577990 IGLV3-25P01717 112 aa23.09■■□□□ 1.29
SMARCD2-206ENST00000577990 LMNAP02545 664 aaKnown RBP23.09■■□□□ 1.29
SMARCD2-206ENST00000577990 SCNN1AP37088 669 aa23.09■■□□□ 1.29
SMARCD2-206ENST00000577990 CDK17Q00537 523 aa23.09■■□□□ 1.29
SMARCD2-206ENST00000577990 PREPLQ4J6C6 727 aaPredicted RBP23.09■■□□□ 1.29
SMARCD2-206ENST00000577990 XYLT1Q86Y38 959 aa23.09■■□□□ 1.29
SMARCD2-206ENST00000577990 PHTF2Q8N3S3 785 aa23.09■■□□□ 1.29
SMARCD2-206ENST00000577990 CCDC26Q8TAB7 109 aa23.09■■□□□ 1.29
SMARCD2-206ENST00000577990 BHMTQ93088 406 aa23.09■■□□□ 1.29
SMARCD2-206ENST00000577990 FCRL2Q96LA5 508 aaPredicted RBP23.09■■□□□ 1.29
SMARCD2-206ENST00000577990 EDEM3Q9BZQ6 932 aa23.09■■□□□ 1.29
SMARCD2-206ENST00000577990 TTYH3Q9C0H2 523 aa23.09■■□□□ 1.29
SMARCD2-206ENST00000577990 DEC1Q9P2X7 70 aa23.09■■□□□ 1.29
SMARCD2-206ENST00000577990 STOML2Q9UJZ1 356 aa23.09■■□□□ 1.29
SMARCD2-206ENST00000577990 LRRC53A6NM62 1247 aa23.08■■□□□ 1.29
SMARCD2-206ENST00000577990 IRAK2O43187 625 aa23.08■■□□□ 1.29
SMARCD2-206ENST00000577990 PENKP01210 267 aaPredicted RBP23.08■■□□□ 1.29
SMARCD2-206ENST00000577990 CYBBP04839 570 aa23.08■■□□□ 1.29
SMARCD2-206ENST00000577990 PBX1P40424 430 aa23.08■■□□□ 1.29
SMARCD2-206ENST00000577990 GRIA2P42262 883 aa23.08■■□□□ 1.29
SMARCD2-206ENST00000577990 CXCL12P48061 93 aa23.08■■□□□ 1.29
SMARCD2-206ENST00000577990 SATB1Q01826 763 aa23.08■■□□□ 1.29
SMARCD2-206ENST00000577990 MESP2Q0VG99 397 aa23.08■■□□□ 1.29
SMARCD2-206ENST00000577990 FIGNQ5HY92 759 aa23.08■■□□□ 1.29
SMARCD2-206ENST00000577990 FYB2Q5VWT5 728 aa23.08■■□□□ 1.29
SMARCD2-206ENST00000577990 GRAMD4Q6IC98 578 aa23.08■■□□□ 1.29
SMARCD2-206ENST00000577990 SLC39A13Q96H72 371 aa23.08■■□□□ 1.29
SMARCD2-206ENST00000577990 PCDHB18PQ96TA0 734 aa23.08■■□□□ 1.29
SMARCD2-206ENST00000577990 AGPAT1Q99943 283 aa23.08■■□□□ 1.29
SMARCD2-206ENST00000577990 FAM204AQ9H8W3 233 aa23.08■■□□□ 1.29
SMARCD2-206ENST00000577990 DNAJC17Q9NVM6 304 aaKnown RBP23.08■■□□□ 1.29
SMARCD2-206ENST00000577990 IFNKQ9P0W0 207 aa23.08■■□□□ 1.29
SMARCD2-206ENST00000577990 CHURC1-FNTBB4DL54 471 aa23.07■■□□□ 1.28
SMARCD2-206ENST00000577990 K7EQS6 105 aa23.07■■□□□ 1.28
SMARCD2-206ENST00000577990 ATG13O75143 517 aa23.07■■□□□ 1.28
SMARCD2-206ENST00000577990 SLC11A2P49281 568 aa23.07■■□□□ 1.28
SMARCD2-206ENST00000577990 ZNF445P59923 1031 aa23.07■■□□□ 1.28
SMARCD2-206ENST00000577990 PITX1P78337 314 aaPredicted RBP23.07■■□□□ 1.28
SMARCD2-206ENST00000577990 PPP2R5DQ14738 602 aa23.07■■□□□ 1.28
SMARCD2-206ENST00000577990 ZNF528Q3MIS6 628 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms