RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 GTPBP10A4D1E9 387 aaKnown RBP13.24□□□□□ -0.29
SSH2-205ENST00000577483 GDF9O60383 454 aa13.24□□□□□ -0.29
SSH2-205ENST00000577483 LETM1O95202 739 aaPredicted RBP13.24□□□□□ -0.29
SSH2-205ENST00000577483 LTFP02788 710 aa13.24□□□□□ -0.29
SSH2-205ENST00000577483 FYNP06241 537 aa13.24□□□□□ -0.29
SSH2-205ENST00000577483 HOXB2P14652 356 aa13.24□□□□□ -0.29
SSH2-205ENST00000577483 PON1P27169 355 aa13.24□□□□□ -0.29
SSH2-205ENST00000577483 GBP1P32455 592 aa13.24□□□□□ -0.29
SSH2-205ENST00000577483 MTIF2P46199 727 aaKnown RBP13.24□□□□□ -0.29
SSH2-205ENST00000577483 MFAP3P55082 362 aa13.24□□□□□ -0.29
SSH2-205ENST00000577483 PUM1Q14671 1186 aaKnown RBP eCLIP13.24□□□□□ -0.29
SSH2-205ENST00000577483 SF3A2Q15428 464 aaKnown RBP13.24□□□□□ -0.29
SSH2-205ENST00000577483 ARHGAP44Q17R89 818 aa13.24□□□□□ -0.29
SSH2-205ENST00000577483 GEN1Q17RS7 908 aa13.24□□□□□ -0.29
SSH2-205ENST00000577483 MIIPQ5JXC2 388 aa13.24□□□□□ -0.29
SSH2-205ENST00000577483 PLA2G2CQ5R387 149 aa13.24□□□□□ -0.29
SSH2-205ENST00000577483 PMS2CLQ68D20 193 aa13.24□□□□□ -0.29
SSH2-205ENST00000577483 GBP6Q6ZN66 633 aa13.24□□□□□ -0.29
SSH2-205ENST00000577483 RNF139Q8WU17 664 aa13.24□□□□□ -0.29
SSH2-205ENST00000577483 ZNF606Q8WXB4 792 aa13.24□□□□□ -0.29
SSH2-205ENST00000577483 IRGQQ8WZA9 623 aa13.24□□□□□ -0.29
SSH2-205ENST00000577483 HSFY1Q96LI6 401 aa13.24□□□□□ -0.29
SSH2-205ENST00000577483 MIS12Q9H081 205 aa13.24□□□□□ -0.29
SSH2-205ENST00000577483 THAP9Q9H5L6 903 aa13.24□□□□□ -0.29
SSH2-205ENST00000577483 POLMQ9NP87 494 aaPredicted RBP13.24□□□□□ -0.29
SSH2-205ENST00000577483 HBS1LQ9Y450 684 aaKnown RBP13.24□□□□□ -0.29
SSH2-205ENST00000577483 GFRA2O00451 464 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 IGLV3-27P01718 113 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 GABRG2P18507 467 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 HOXD9P28356 352 aaPredicted RBP13.23□□□□□ -0.29
SSH2-205ENST00000577483 GNA15P30679 374 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 NTSR1P30989 418 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 MPLP40238 635 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 SGSHP51688 502 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 ATXN1P54253 815 aaKnown RBP13.23□□□□□ -0.29
SSH2-205ENST00000577483 MAN2A1Q16706 1144 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 EXOC3L4Q17RC7 722 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 USP39Q53GS9 565 aaKnown RBP13.23□□□□□ -0.29
SSH2-205ENST00000577483 KIAA1211LQ6NV74 962 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 NUDT18Q6ZVK8 323 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 ENOSF1Q7L5Y1 443 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 ERMP1Q7Z2K6 904 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 TRMT11Q7Z4G4 463 aaKnown RBP13.23□□□□□ -0.29
SSH2-205ENST00000577483 SCUBE3Q8IX30 993 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 GPT2Q8TD30 523 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 SHC3Q92529 594 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 GABRG3Q99928 467 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 RXFP3Q9NSD7 469 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 TJP2Q9UDY2 1190 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 STOML2Q9UJZ1 356 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 SLC27A6Q9Y2P4 619 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 RAD54BQ9Y620 910 aa13.23□□□□□ -0.29
SSH2-205ENST00000577483 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.22□□□□□ -0.29
SSH2-205ENST00000577483 PRR5-ARHGAP8B1AHC4 643 aa13.22□□□□□ -0.29
SSH2-205ENST00000577483 WASH3PC4AMC7 463 aa13.22□□□□□ -0.29
SSH2-205ENST00000577483 THAP12O43422 761 aa13.22□□□□□ -0.29
SSH2-205ENST00000577483 ALDH1A2O94788 518 aa13.22□□□□□ -0.29
SSH2-205ENST00000577483 FBXO21O94952 628 aa13.22□□□□□ -0.29
SSH2-205ENST00000577483 PNMA6AP0CW24 399 aaPredicted RBP13.22□□□□□ -0.29
SSH2-205ENST00000577483 ERCC5P28715 1186 aaPredicted RBP13.22□□□□□ -0.29
SSH2-205ENST00000577483 P2RY2P41231 377 aa13.22□□□□□ -0.29
SSH2-205ENST00000577483 HARS2P49590 506 aaKnown RBP13.22□□□□□ -0.29
SSH2-205ENST00000577483 ARHGAP8P85298 464 aa13.22□□□□□ -0.29
SSH2-205ENST00000577483 ELF2Q15723 593 aa13.22□□□□□ -0.29
SSH2-205ENST00000577483 TPD52L1Q16890 204 aaPredicted RBP13.22□□□□□ -0.29
SSH2-205ENST00000577483 DPY19L2P1Q6NXN4 242 aa13.22□□□□□ -0.29
SSH2-205ENST00000577483 DGLUCYQ7Z3D6 616 aa13.22□□□□□ -0.29
SSH2-205ENST00000577483 CHPFQ8IZ52 775 aa13.22□□□□□ -0.29
SSH2-205ENST00000577483 DDI1Q8WTU0 396 aa13.22□□□□□ -0.29
SSH2-205ENST00000577483 PIWIL1Q96J94 861 aaKnown RBP13.22□□□□□ -0.29
SSH2-205ENST00000577483 SLC4A5Q9BY07 1137 aa13.22□□□□□ -0.29
SSH2-205ENST00000577483 ST7Q9NRC1 585 aa13.22□□□□□ -0.29
SSH2-205ENST00000577483 CACNA2D2Q9NY47 1150 aa13.22□□□□□ -0.29
SSH2-205ENST00000577483 BCCIPQ9P287 314 aaKnown RBP eCLIP13.22□□□□□ -0.29
SSH2-205ENST00000577483 MBD1Q9UIS9 605 aaPredicted RBP13.22□□□□□ -0.29
SSH2-205ENST00000577483 CDV3Q9UKY7 258 aaKnown RBP13.22□□□□□ -0.29
SSH2-205ENST00000577483 PCDH15Q96QU1 1955 aa13.22□□□□□ -0.29
SSH2-205ENST00000577483 E5RJQ4 531 aa13.21□□□□□ -0.29
SSH2-205ENST00000577483 PAPSS1O43252 624 aaPredicted RBP13.21□□□□□ -0.29
SSH2-205ENST00000577483 MED7O43513 233 aa13.21□□□□□ -0.29
SSH2-205ENST00000577483 TSPAN3O60637 253 aa13.21□□□□□ -0.29
SSH2-205ENST00000577483 CYBBP04839 570 aa13.21□□□□□ -0.29
SSH2-205ENST00000577483 ZNF806P0C7X5 589 aa13.21□□□□□ -0.29
SSH2-205ENST00000577483 NCAM1P13591 858 aa13.21□□□□□ -0.29
SSH2-205ENST00000577483 USP8P40818 1118 aa13.21□□□□□ -0.29
SSH2-205ENST00000577483 CREB5Q02930 508 aa13.21□□□□□ -0.29
SSH2-205ENST00000577483 MEA1Q16626 185 aa13.21□□□□□ -0.29
SSH2-205ENST00000577483 MAP7D1Q3KQU3 841 aa13.21□□□□□ -0.29
SSH2-205ENST00000577483 TMEM215Q68D42 235 aa13.21□□□□□ -0.29
SSH2-205ENST00000577483 TCEAL6Q6IPX3 200 aa13.21□□□□□ -0.29
SSH2-205ENST00000577483 DQX1Q8TE96 717 aaKnown RBP13.21□□□□□ -0.29
SSH2-205ENST00000577483 IPO4Q8TEX9 1081 aaKnown RBP13.21□□□□□ -0.29
SSH2-205ENST00000577483 TCEAL3Q969E4 200 aa13.21□□□□□ -0.29
SSH2-205ENST00000577483 TUBGCP2Q9BSJ2 902 aa13.21□□□□□ -0.29
SSH2-205ENST00000577483 NDST4Q9H3R1 872 aa13.21□□□□□ -0.29
SSH2-205ENST00000577483 CD93Q9NPY3 652 aa13.21□□□□□ -0.29
SSH2-205ENST00000577483 SAMSN1Q9NSI8 373 aaKnown RBP13.21□□□□□ -0.29
SSH2-205ENST00000577483 CALCOCO1Q9P1Z2 691 aa13.21□□□□□ -0.29
SSH2-205ENST00000577483 NAALADL1Q9UQQ1 740 aa13.21□□□□□ -0.29
SSH2-205ENST00000577483 PCDHGA5Q9Y5G8 931 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms