RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 EPC1Q9H2F5 836 aa27.52■■■□□ 2
PPP4R1-204ENST00000577393 PTPRZ1P23471 2315 aaPredicted RBP27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 EPHB6O15197 1021 aa27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 IGLV3-27P01718 113 aa27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 CISD3P0C7P0 127 aa27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 ATP1A3P13637 1013 aa27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 TBX4P57082 545 aa27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 POLR2FP61218 127 aaKnown RBP27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 UBXN1Q04323 297 aa27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 SYCP1Q15431 976 aa27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 C10orf76Q5T2E6 689 aa27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 SYPL2Q5VXT5 272 aa27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 TOGARAM2Q6ZUX3 1019 aa27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 NUDT18Q6ZVK8 323 aa27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 WDR5BQ86VZ2 330 aa27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 DHX40Q8IX18 779 aaKnown RBP27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 ALLCQ8N6M5 410 aa27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 IL17RCQ8NAC3 791 aa27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 PIWIL1Q96J94 861 aaKnown RBP27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 TRIM62Q9BVG3 475 aa27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 PDCL3Q9H2J4 239 aa27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 FBXO10Q9UK96 956 aa27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 MMP17Q9ULZ9 603 aa27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 CEP83Q9Y592 693 aa27.51■■□□□ 1.99
PPP4R1-204ENST00000577393 CAPN9O14815 690 aa27.5■■□□□ 1.99
PPP4R1-204ENST00000577393 HRO43593 1189 aa27.5■■□□□ 1.99
PPP4R1-204ENST00000577393 KLF8O95600 359 aaPredicted RBP27.5■■□□□ 1.99
PPP4R1-204ENST00000577393 LATS1O95835 1130 aa27.5■■□□□ 1.99
PPP4R1-204ENST00000577393 CYBBP04839 570 aa27.5■■□□□ 1.99
PPP4R1-204ENST00000577393 DGKGP49619 791 aa27.5■■□□□ 1.99
PPP4R1-204ENST00000577393 YWHAZP63104 245 aaKnown RBP27.5■■□□□ 1.99
PPP4R1-204ENST00000577393 RING1Q06587 406 aa27.5■■□□□ 1.99
PPP4R1-204ENST00000577393 TAF5Q15542 800 aa27.5■■□□□ 1.99
PPP4R1-204ENST00000577393 TAF3Q5VWG9 929 aa27.5■■□□□ 1.99
PPP4R1-204ENST00000577393 DDX1Q92499 740 aaKnown RBP27.5■■□□□ 1.99
PPP4R1-204ENST00000577393 PCMTD1Q96MG8 357 aaPredicted RBP27.5■■□□□ 1.99
PPP4R1-204ENST00000577393 FUCA2Q9BTY2 467 aa27.5■■□□□ 1.99
PPP4R1-204ENST00000577393 POPDC2Q9HBU9 364 aa27.5■■□□□ 1.99
PPP4R1-204ENST00000577393 ZDHHC4Q9NPG8 344 aa27.5■■□□□ 1.99
PPP4R1-204ENST00000577393 NLRC4Q9NPP4 1024 aa27.5■■□□□ 1.99
PPP4R1-204ENST00000577393 STOML2Q9UJZ1 356 aa27.5■■□□□ 1.99
PPP4R1-204ENST00000577393 FAM186AA6NE01 2351 aa27.5■■□□□ 1.99
PPP4R1-204ENST00000577393 MYO18AQ92614 2054 aaKnown RBP27.49■■□□□ 1.99
PPP4R1-204ENST00000577393 SMTNL1A8MU46 457 aa27.49■■□□□ 1.99
PPP4R1-204ENST00000577393 ERBB2P04626 1255 aa27.49■■□□□ 1.99
PPP4R1-204ENST00000577393 SRSF5Q13243 272 aaKnown RBP27.49■■□□□ 1.99
PPP4R1-204ENST00000577393 HSF5Q4G112 596 aaPredicted RBP27.49■■□□□ 1.99
PPP4R1-204ENST00000577393 PTPN20Q4JDL3 420 aa27.49■■□□□ 1.99
PPP4R1-204ENST00000577393 ADGRF1Q5T601 910 aa27.49■■□□□ 1.99
PPP4R1-204ENST00000577393 NUGGCQ68CJ6 796 aa27.49■■□□□ 1.99
PPP4R1-204ENST00000577393 NOP9Q86U38 636 aaKnown RBP27.49■■□□□ 1.99
PPP4R1-204ENST00000577393 TAC4Q86UU9 113 aa27.49■■□□□ 1.99
PPP4R1-204ENST00000577393 UNC45BQ8IWX7 931 aa27.49■■□□□ 1.99
PPP4R1-204ENST00000577393 TXNDC5Q8NBS9 432 aaKnown RBP27.49■■□□□ 1.99
PPP4R1-204ENST00000577393 ADAM32Q8TC27 787 aa27.49■■□□□ 1.99
PPP4R1-204ENST00000577393 DDI1Q8WTU0 396 aa27.49■■□□□ 1.99
PPP4R1-204ENST00000577393 SERPINB11Q96P15 392 aa27.49■■□□□ 1.99
PPP4R1-204ENST00000577393 GPR179Q6PRD1 2367 aa27.48■■□□□ 1.99
PPP4R1-204ENST00000577393 CCDC163A0A0D9SF12 145 aa27.48■■□□□ 1.99
PPP4R1-204ENST00000577393 GFPT2O94808 682 aa27.48■■□□□ 1.99
PPP4R1-204ENST00000577393 APBB3O95704 486 aa27.48■■□□□ 1.99
PPP4R1-204ENST00000577393 CNR2P34972 360 aa27.48■■□□□ 1.99
PPP4R1-204ENST00000577393 ZNF165P49910 485 aa27.48■■□□□ 1.99
PPP4R1-204ENST00000577393 JAM2P57087 298 aa27.48■■□□□ 1.99
PPP4R1-204ENST00000577393 OR6B2Q6IFH4 312 aa27.48■■□□□ 1.99
PPP4R1-204ENST00000577393 FAM183BPQ6ZVS7 135 aa27.48■■□□□ 1.99
PPP4R1-204ENST00000577393 TMEM35BQ8NCS4 154 aa27.48■■□□□ 1.99
PPP4R1-204ENST00000577393 KCNV2Q8TDN2 545 aa27.48■■□□□ 1.99
PPP4R1-204ENST00000577393 FCRL2Q96LA5 508 aaPredicted RBP27.48■■□□□ 1.99
PPP4R1-204ENST00000577393 ERGIC2Q96RQ1 377 aa27.48■■□□□ 1.99
PPP4R1-204ENST00000577393 HCN2Q9UL51 889 aa27.48■■□□□ 1.99
PPP4R1-204ENST00000577393 SMG5Q9UPR3 1016 aaKnown RBP27.48■■□□□ 1.99
PPP4R1-204ENST00000577393 TLR6Q9Y2C9 796 aa27.48■■□□□ 1.99
PPP4R1-204ENST00000577393 STARD13Q9Y3M8 1113 aa27.48■■□□□ 1.99
PPP4R1-204ENST00000577393 DAAM1Q9Y4D1 1078 aa27.48■■□□□ 1.99
PPP4R1-204ENST00000577393 SYCE3A1L190 88 aa27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 PRRT4C9JH25 899 aa27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 SGK1O00141 431 aa27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 GFRA2O00451 464 aa27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 TSPAN3O60637 253 aa27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 GLI1P08151 1106 aa27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 CDH5P33151 784 aaPredicted RBP27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 SNX16P57768 344 aa27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 NNTQ13423 1086 aa27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 CRY1Q16526 586 aa27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 MPPE1Q53F39 396 aa27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 EFHC1Q5JVL4 640 aa27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 TMEM92Q6UXU6 159 aa27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 ZNF513Q8N8E2 541 aaPredicted RBP27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 TSTD1Q8NFU3 115 aa27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 NEK11Q8NG66 645 aa27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 EPS8L1Q8TE68 723 aa27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 IPO4Q8TEX9 1081 aaKnown RBP27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 SLC39A13Q96H72 371 aa27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 SYNCQ9H7C4 482 aa27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 ASNSD1Q9NWL6 643 aa27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 CLEC4EQ9ULY5 219 aa27.47■■□□□ 1.99
PPP4R1-204ENST00000577393 ADAM23O75077 832 aa27.46■■□□□ 1.99
PPP4R1-204ENST00000577393 PTMSP20962 102 aa27.46■■□□□ 1.99
PPP4R1-204ENST00000577393 SOX5P35711 763 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms