RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 SEMA4GQ9NTN9 838 aa2.89□□□□□ -1.95
COPS3-213ENST00000577210 FZD4Q9ULV1 537 aa2.89□□□□□ -1.95
COPS3-213ENST00000577210 MORC2Q9Y6X9 1032 aaPredicted RBP2.89□□□□□ -1.95
COPS3-213ENST00000577210 CCDC189A1A4V9 331 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 MBD3L5A6NJ08 208 aaPredicted RBP2.88□□□□□ -1.95
COPS3-213ENST00000577210 SAC3D1A6NKF1 404 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 TMEM232C9JQI7 657 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 PCDH17O14917 1159 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 NPHP1O15259 732 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 NKX2-8O15522 239 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 EXOC3O60645 756 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 CBFA2T3O75081 653 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 SGPL1O95470 568 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 TFRCP02786 760 aaKnown RBP2.88□□□□□ -1.95
COPS3-213ENST00000577210 ALDOAP04075 364 aaKnown RBP2.88□□□□□ -1.95
COPS3-213ENST00000577210 CD63P08962 238 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 DHRS4L1P0CG22 281 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 KRT4P19013 534 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 AKT1P31749 480 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 SLC8A1P32418 973 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 DIO1P49895 249 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 COPB1P53618 953 aaKnown RBP2.88□□□□□ -1.95
COPS3-213ENST00000577210 RBM6P78332 1123 aaKnown RBP2.88□□□□□ -1.95
COPS3-213ENST00000577210 LMAN2Q12907 356 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 SLC10A2Q12908 348 aaPredicted RBP2.88□□□□□ -1.95
COPS3-213ENST00000577210 MTAPQ13126 283 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 KCNB1Q14721 858 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 LARS2Q15031 903 aaKnown RBP2.88□□□□□ -1.95
COPS3-213ENST00000577210 CNGA3Q16281 694 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 GPR162Q16538 588 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 PFKFB3Q16875 520 aaPredicted RBP2.88□□□□□ -1.95
COPS3-213ENST00000577210 FAM187BQ17R55 369 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 FCRLBQ6BAA4 426 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 ACSM6Q6P461 480 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 CCDC174Q6PII3 467 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 KIRREL2Q6UWL6 708 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 MYCT1Q8N699 235 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 METTL25Q8N6Q8 603 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 LINC01465Q8N7H1 131 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 USP38Q8NB14 1042 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 SPPL3Q8TCT6 385 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 STYXQ8WUJ0 223 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 HMGB4Q8WW32 186 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 C18orf8Q96DM3 657 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 LENG8Q96PV6 779 aaPredicted RBP2.88□□□□□ -1.95
COPS3-213ENST00000577210 MMS19Q96T76 1030 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 SENP7Q9BQF6 1050 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 FAM167BQ9BTA0 163 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 DDX23Q9BUQ8 820 aaKnown RBP2.88□□□□□ -1.95
COPS3-213ENST00000577210 PABPC3Q9H361 631 aaKnown RBP2.88□□□□□ -1.95
COPS3-213ENST00000577210 CCDC134Q9H6E4 229 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 PRDM16Q9HAZ2 1276 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 USP29Q9HBJ7 922 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 NOD2Q9HC29 1040 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 PRDM8Q9NQV8 689 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 IGSF9Q9P2J2 1179 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 SUFUQ9UMX1 484 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 ST3GAL5Q9UNP4 418 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 ZBTB1Q9Y2K1 713 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 SIRT4Q9Y6E7 314 aaPredicted RBP2.88□□□□□ -1.95
COPS3-213ENST00000577210 SPATA31A5Q5VU36 1347 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 SPATA31A6Q5VVP1 1343 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 SPATA31A7Q8IWB4 1347 aa2.88□□□□□ -1.95
COPS3-213ENST00000577210 TBC1D3DA0A087WVF3 549 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 TBC1D3IA0A087WXS9 549 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 TBC1D3EA0A087X179 549 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 TBC1D3KA0A087X1G2 549 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 CCDC196A0A1B0GTZ2 297 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 TBC1D3BA6NDS4 549 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 TBC1D3FA6NER0 549 aaPredicted RBP2.87□□□□□ -1.95
COPS3-213ENST00000577210 HMX3A6NHT5 357 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 AQP12BA6NM10 295 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 TBC1D3LB9A6J9 549 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 AGPSO00116 658 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 TRIM38O00635 465 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 DHHO43323 396 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 DNPH1O43598 174 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 SH3BP5O60239 455 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 NBNO60934 754 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 TAF5LO75529 589 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 VNN1O95497 513 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 NUDT3O95989 172 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 TBC1D3HP0C7X1 549 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 PROZP22891 400 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 YY1P25490 414 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 CERS1P27544 350 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 ITPKBP27987 946 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 TACR3P29371 465 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 PBX1P40424 430 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 OAZ1P54368 228 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 TUBA4AP68366 448 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 HSF1Q00613 529 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 NHLH1Q02575 133 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 GOLGA8FQ08AF8 430 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 GALNT1Q10472 559 aaPredicted RBP2.87□□□□□ -1.95
COPS3-213ENST00000577210 SF3A3Q12874 501 aaKnown RBP eCLIP2.87□□□□□ -1.95
COPS3-213ENST00000577210 MFSD13AQ14CX5 517 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 FAM110CQ1W6H9 321 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 AAK1Q2M2I8 961 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 TMEM95Q3KNT9 176 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms