RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 SLC18B1Q6NT16 456 aa6.1□□□□□ -1.43
NUP88-213ENST00000576862 ACSM6Q6P461 480 aa6.1□□□□□ -1.43
NUP88-213ENST00000576862 STYXQ8WUJ0 223 aa6.1□□□□□ -1.43
NUP88-213ENST00000576862 CRB3Q9BUF7 120 aa6.1□□□□□ -1.43
NUP88-213ENST00000576862 ADGRE3Q9BY15 652 aa6.1□□□□□ -1.43
NUP88-213ENST00000576862 PLCB1Q9NQ66 1216 aa6.1□□□□□ -1.43
NUP88-213ENST00000576862 SCAF8Q9UPN6 1271 aaKnown RBP6.1□□□□□ -1.43
NUP88-213ENST00000576862 PNMA6EA0A0J9YXQ4 647 aa6.09□□□□□ -1.43
NUP88-213ENST00000576862 NPC1O15118 1278 aa6.09□□□□□ -1.43
NUP88-213ENST00000576862 FFAR2O15552 330 aa6.09□□□□□ -1.43
NUP88-213ENST00000576862 ASNA1O43681 348 aa6.09□□□□□ -1.43
NUP88-213ENST00000576862 MMP8P22894 467 aa6.09□□□□□ -1.43
NUP88-213ENST00000576862 DUSP1P28562 367 aa6.09□□□□□ -1.43
NUP88-213ENST00000576862 ABCG1P45844 678 aa6.09□□□□□ -1.43
NUP88-213ENST00000576862 TNFAIP2Q03169 654 aa6.09□□□□□ -1.43
NUP88-213ENST00000576862 GALNT1Q10472 559 aaPredicted RBP6.09□□□□□ -1.43
NUP88-213ENST00000576862 DAZAP2Q15038 168 aaPredicted RBP6.09□□□□□ -1.43
NUP88-213ENST00000576862 TRIM71Q2Q1W2 868 aaKnown RBP6.09□□□□□ -1.43
NUP88-213ENST00000576862 P3H1Q32P28 736 aa6.09□□□□□ -1.43
NUP88-213ENST00000576862 C16orf89Q6UX73 402 aa6.09□□□□□ -1.43
NUP88-213ENST00000576862 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.09□□□□□ -1.43
NUP88-213ENST00000576862 MAP4K1Q92918 833 aa6.09□□□□□ -1.43
NUP88-213ENST00000576862 MCRS1Q96EZ8 462 aa6.09□□□□□ -1.43
NUP88-213ENST00000576862 PAAF1Q9BRP4 392 aa6.09□□□□□ -1.43
NUP88-213ENST00000576862 OBP2BQ9NPH6 170 aa6.09□□□□□ -1.43
NUP88-213ENST00000576862 KLHL13Q9P2N7 655 aa6.09□□□□□ -1.43
NUP88-213ENST00000576862 LRCH1Q9Y2L9 728 aa6.09□□□□□ -1.43
NUP88-213ENST00000576862 DNAJC9-AS1A6NH13 148 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 LGALS16A8MUM7 142 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 FCHO1O14526 889 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 PRYO14603 147 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 BCAR3O75815 825 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 KELP23276 732 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 KLRK1P26718 216 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 PDIA3P30101 505 aaKnown RBP6.08□□□□□ -1.44
NUP88-213ENST00000576862 MORC3Q14149 939 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 CSHL1Q14406 222 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 SPARCL1Q14515 664 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 KPNB1Q14974 876 aaKnown RBP6.08□□□□□ -1.44
NUP88-213ENST00000576862 ELF2Q15723 593 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 CC2D1BQ5T0F9 858 aaKnown RBP6.08□□□□□ -1.44
NUP88-213ENST00000576862 ZNF626Q68DY1 528 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 MIS18BP1Q6P0N0 1132 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 GGT6Q6P531 493 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 KYAT3Q6YP21 454 aaKnown RBP6.08□□□□□ -1.44
NUP88-213ENST00000576862 ZNF527Q8NB42 609 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 OR52L2PQ8NGH6 319 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 OR1N1Q8NGS0 311 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 OSR1Q8TAX0 266 aaPredicted RBP6.08□□□□□ -1.44
NUP88-213ENST00000576862 SLC22A17Q8WUG5 538 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 GLMPQ8WWB7 406 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 NPIPB3Q92617 1050 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 PRPF18Q99633 342 aaKnown RBP6.08□□□□□ -1.44
NUP88-213ENST00000576862 CDCP1Q9H5V8 836 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 KCNK9Q9NPC2 374 aa6.08□□□□□ -1.44
NUP88-213ENST00000576862 MAGED2Q9UNF1 606 aaPredicted RBP6.08□□□□□ -1.44
NUP88-213ENST00000576862 CYP2D7A0A087X1C5 515 aa6.07□□□□□ -1.44
NUP88-213ENST00000576862 RRHO14718 337 aa6.07□□□□□ -1.44
NUP88-213ENST00000576862 DNPH1O43598 174 aa6.07□□□□□ -1.44
NUP88-213ENST00000576862 TNFRSF6BO95407 300 aa6.07□□□□□ -1.44
NUP88-213ENST00000576862 MATN1P21941 496 aa6.07□□□□□ -1.44
NUP88-213ENST00000576862 ARHGAP25P42331 645 aa6.07□□□□□ -1.44
NUP88-213ENST00000576862 PTK2BQ14289 1009 aa6.07□□□□□ -1.44
NUP88-213ENST00000576862 ZNF268Q14587 947 aaPredicted RBP6.07□□□□□ -1.44
NUP88-213ENST00000576862 EZH2Q15910 746 aaKnown RBP6.07□□□□□ -1.44
NUP88-213ENST00000576862 SRSF7Q16629 238 aaKnown RBP eCLIP6.07□□□□□ -1.44
NUP88-213ENST00000576862 PFKFB4Q16877 469 aa6.07□□□□□ -1.44
NUP88-213ENST00000576862 MTX3Q5HYI7 312 aa6.07□□□□□ -1.44
NUP88-213ENST00000576862 C1orf228Q6PIY5 440 aa6.07□□□□□ -1.44
NUP88-213ENST00000576862 TFAP2DQ7Z6R9 452 aa6.07□□□□□ -1.44
NUP88-213ENST00000576862 FAM71BQ8TC56 605 aa6.07□□□□□ -1.44
NUP88-213ENST00000576862 IGFBPL1Q8WX77 278 aa6.07□□□□□ -1.44
NUP88-213ENST00000576862 AKAP1Q92667 903 aaKnown RBP eCLIP6.07□□□□□ -1.44
NUP88-213ENST00000576862 EIF3CQ99613 913 aaKnown RBP6.07□□□□□ -1.44
NUP88-213ENST00000576862 GATA5Q9BWX5 397 aaPredicted RBP6.07□□□□□ -1.44
NUP88-213ENST00000576862 RNF26Q9BY78 433 aaPredicted RBP6.07□□□□□ -1.44
NUP88-213ENST00000576862 PRSS22Q9GZN4 317 aa6.07□□□□□ -1.44
NUP88-213ENST00000576862 NUAK2Q9H093 628 aa6.07□□□□□ -1.44
NUP88-213ENST00000576862 TP63Q9H3D4 680 aaPredicted RBP6.07□□□□□ -1.44
NUP88-213ENST00000576862 AGO4Q9HCK5 861 aaKnown RBP6.07□□□□□ -1.44
NUP88-213ENST00000576862 MLXIPLQ9NP71 852 aa6.07□□□□□ -1.44
NUP88-213ENST00000576862 PCDHB7Q9Y5E2 793 aa6.07□□□□□ -1.44
NUP88-213ENST00000576862 ZNF804BA4D1E1 1349 aa6.06□□□□□ -1.44
NUP88-213ENST00000576862 TP73O15350 636 aa6.06□□□□□ -1.44
NUP88-213ENST00000576862 CER1O95813 267 aa6.06□□□□□ -1.44
NUP88-213ENST00000576862 ATP5F1P24539 256 aaPredicted RBP6.06□□□□□ -1.44
NUP88-213ENST00000576862 IDUAP35475 653 aa6.06□□□□□ -1.44
NUP88-213ENST00000576862 ALDH18A1P54886 795 aaKnown RBP6.06□□□□□ -1.44
NUP88-213ENST00000576862 PUM3Q15397 648 aaKnown RBP6.06□□□□□ -1.44
NUP88-213ENST00000576862 CNGA3Q16281 694 aa6.06□□□□□ -1.44
NUP88-213ENST00000576862 ZKSCAN2Q63HK3 967 aa6.06□□□□□ -1.44
NUP88-213ENST00000576862 PGBD2Q6P3X8 592 aa6.06□□□□□ -1.44
NUP88-213ENST00000576862 SLC2A7Q6PXP3 512 aa6.06□□□□□ -1.44
NUP88-213ENST00000576862 VPS37AQ8NEZ2 397 aa6.06□□□□□ -1.44
NUP88-213ENST00000576862 POF1BQ8WVV4 589 aa6.06□□□□□ -1.44
NUP88-213ENST00000576862 ELOVL1Q9BW60 279 aa6.06□□□□□ -1.44
NUP88-213ENST00000576862 LOC105369274A0A096LPK9 316 aa6.05□□□□□ -1.44
NUP88-213ENST00000576862 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.05□□□□□ -1.44
NUP88-213ENST00000576862 LOC102723532A0A0G2JNH3 316 aa6.05□□□□□ -1.44
NUP88-213ENST00000576862 WDR91A4D1P6 747 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms