RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 DUS2Q9NX74 493 aaKnown RBP14.56□□□□□ -0.08
RPAIN-217ENST00000575711 MUTYHQ9UIF7 546 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 DUSP12Q9UNI6 340 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 ZNF510Q9Y2H8 683 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 WNT6Q9Y6F9 365 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 EPN1Q9Y6I3 576 aaPredicted RBP14.56□□□□□ -0.08
RPAIN-217ENST00000575711 SCAMP3O14828 347 aaKnown RBP14.55□□□□□ -0.08
RPAIN-217ENST00000575711 NARSO43776 548 aaKnown RBP14.55□□□□□ -0.08
RPAIN-217ENST00000575711 IGLV3-27P01718 113 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 APOEP02649 317 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 TMEM253P0C7T8 217 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 SLC2A3P11169 496 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 SRFP11831 508 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 CCR1P32246 355 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 RDXP35241 583 aaKnown RBP14.55□□□□□ -0.08
RPAIN-217ENST00000575711 MAGEA1P43355 309 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 PTPN9P43378 593 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 ZNF143P52747 638 aaPredicted RBP14.55□□□□□ -0.08
RPAIN-217ENST00000575711 RPL7AP62424 266 aaKnown RBP14.55□□□□□ -0.08
RPAIN-217ENST00000575711 ATP11AP98196 1134 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 PFKPQ01813 784 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 DEUP1Q05D60 604 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 CCDC14Q49A88 953 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 RAD9BQ6WBX8 426 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 SND1Q7KZF4 910 aaKnown RBP eCLIP14.55□□□□□ -0.08
RPAIN-217ENST00000575711 DENND1CQ8IV53 801 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 BBS7Q8IWZ6 715 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 UBALD2Q8IYN6 164 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 RNF34Q969K3 372 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 WBP2Q969T9 261 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 OTUB2Q96DC9 234 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 SLC39A13Q96H72 371 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 ZFYVE19Q96K21 471 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 FCRL2Q96LA5 508 aaPredicted RBP14.55□□□□□ -0.08
RPAIN-217ENST00000575711 FAM83CQ9BQN1 747 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.55□□□□□ -0.08
RPAIN-217ENST00000575711 INTUQ9ULD6 942 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 PAXBP1Q9Y5B6 917 aa14.55□□□□□ -0.08
RPAIN-217ENST00000575711 TMEM191CA6NGB0 347 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 GREM1O60565 184 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 KLKB1P03952 638 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 PTMAP06454 111 aaKnown RBP14.54□□□□□ -0.08
RPAIN-217ENST00000575711 TFE3P19532 575 aaPredicted RBP14.54□□□□□ -0.08
RPAIN-217ENST00000575711 SLC11A2P49281 568 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 MTA1Q13330 715 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 EIF4EBP2Q13542 120 aaPredicted RBP14.54□□□□□ -0.08
RPAIN-217ENST00000575711 CDO1Q16878 200 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 C15orf59Q2T9L4 293 aaPredicted RBP14.54□□□□□ -0.08
RPAIN-217ENST00000575711 ZC3H12AQ5D1E8 599 aaKnown RBP14.54□□□□□ -0.08
RPAIN-217ENST00000575711 OTUD1Q5VV17 481 aaPredicted RBP14.54□□□□□ -0.08
RPAIN-217ENST00000575711 TRIM68Q6AZZ1 485 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 Q6ZNB5 142 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 STRADAQ7RTN6 431 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 LRRC8AQ8IWT6 810 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 CSGALNACT1Q8TDX6 532 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 FNIP1Q8TF40 1166 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 DNASE1L2Q92874 299 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 ATP2A3Q93084 1043 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 ARHGEF26Q96DR7 871 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 ASIC4Q96FT7 647 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 CNPY3Q9BT09 278 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 NUP85Q9BW27 656 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 EBF3Q9H4W6 596 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 SLC2A4RGQ9NR83 387 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 PIGVQ9NUD9 493 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 CTTNBP2NLQ9P2B4 639 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 UVRAGQ9P2Y5 699 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 SLC12A6Q9UHW9 1150 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 AGO1Q9UL18 857 aaKnown RBP14.54□□□□□ -0.08
RPAIN-217ENST00000575711 PCDHA13Q9Y5I0 950 aa14.54□□□□□ -0.08
RPAIN-217ENST00000575711 HELZP42694 1942 aaKnown RBP14.54□□□□□ -0.08
RPAIN-217ENST00000575711 CCP110O43303 1012 aa14.53□□□□□ -0.08
RPAIN-217ENST00000575711 NFATC1O95644 943 aa14.53□□□□□ -0.08
RPAIN-217ENST00000575711 LATS1O95835 1130 aa14.53□□□□□ -0.08
RPAIN-217ENST00000575711 MOCS2O96007 188 aaPredicted RBP14.53□□□□□ -0.08
RPAIN-217ENST00000575711 PSMA2P25787 234 aa14.53□□□□□ -0.08
RPAIN-217ENST00000575711 PPP2R5DQ14738 602 aa14.53□□□□□ -0.08
RPAIN-217ENST00000575711 EML3Q32P44 896 aa14.53□□□□□ -0.08
RPAIN-217ENST00000575711 BRMS1LQ5PSV4 323 aa14.53□□□□□ -0.08
RPAIN-217ENST00000575711 BNIPLQ7Z465 357 aa14.53□□□□□ -0.08
RPAIN-217ENST00000575711 CPA6Q8N4T0 437 aa14.53□□□□□ -0.08
RPAIN-217ENST00000575711 ATP6V0D2Q8N8Y2 350 aa14.53□□□□□ -0.08
RPAIN-217ENST00000575711 ZNF564Q8TBZ8 553 aaPredicted RBP14.53□□□□□ -0.08
RPAIN-217ENST00000575711 FAM172AQ8WUF8 416 aa14.53□□□□□ -0.08
RPAIN-217ENST00000575711 PDLIM2Q96JY6 352 aa14.53□□□□□ -0.08
RPAIN-217ENST00000575711 ADAM33Q9BZ11 813 aa14.53□□□□□ -0.08
RPAIN-217ENST00000575711 LINC00597Q9H2U6 94 aa14.53□□□□□ -0.08
RPAIN-217ENST00000575711 WDCPQ9H6R7 721 aa14.53□□□□□ -0.08
RPAIN-217ENST00000575711 TRPV5Q9NQA5 729 aa14.53□□□□□ -0.08
RPAIN-217ENST00000575711 CALCOCO1Q9P1Z2 691 aa14.53□□□□□ -0.08
RPAIN-217ENST00000575711 ANAPC7Q9UJX3 599 aa14.53□□□□□ -0.08
RPAIN-217ENST00000575711 ARNTLO00327 626 aa14.52□□□□□ -0.09
RPAIN-217ENST00000575711 ARHGAP6O43182 974 aa14.52□□□□□ -0.09
RPAIN-217ENST00000575711 ENDOD1O94919 500 aa14.52□□□□□ -0.09
RPAIN-217ENST00000575711 ARSAP15289 507 aa14.52□□□□□ -0.09
RPAIN-217ENST00000575711 CHKAP35790 457 aa14.52□□□□□ -0.09
RPAIN-217ENST00000575711 CXCR3P49682 368 aa14.52□□□□□ -0.09
RPAIN-217ENST00000575711 KRT83P78385 493 aa14.52□□□□□ -0.09
RPAIN-217ENST00000575711 OGDHQ02218 1023 aa14.52□□□□□ -0.09
RPAIN-217ENST00000575711 TNK2Q07912 1038 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms