RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 NNTQ13423 1086 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 RAPGEF1Q13905 1077 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 ZSCAN23Q3MJ62 389 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 TMEM215Q68D42 235 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 SLC26A9Q7LBE3 791 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 XYLT1Q86Y38 959 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 CREBRFQ8IUR6 639 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 IL17RCQ8NAC3 791 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 TTC16Q8NEE8 873 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 ZNF397Q8NF99 534 aaPredicted RBP9.06□□□□□ -0.96
SMG6-216ENST00000575176 NT5C3BQ969T7 300 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 FAM122AQ96E09 287 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 CDK5RAP1Q96SZ6 601 aaKnown RBP9.06□□□□□ -0.96
SMG6-216ENST00000575176 PCDHB18PQ96TA0 734 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 MIS12Q9H081 205 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 EPC1Q9H2F5 836 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 ZDHHC4Q9NPG8 344 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 ABCC13Q9NSE7 274 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 SH3BP1Q9Y3L3 701 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 HBS1LQ9Y450 684 aaKnown RBP9.06□□□□□ -0.96
SMG6-216ENST00000575176 THADAQ6YHU6 1953 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 ABCA7Q8IZY2 2146 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 SLC12A8A0AV02 714 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 STK25O00506 426 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 MED7O43513 233 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 DAB1O75553 588 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 KAT7O95251 611 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 LATS1O95835 1130 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 HMBSP08397 361 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 C7P10643 843 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 RALAP11233 206 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 UNGP13051 313 aaPredicted RBP9.05□□□□□ -0.96
SMG6-216ENST00000575176 TYRP14679 529 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 SOX5P35711 763 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 ZNF165P49910 485 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 CCR3P51677 355 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 GSCP56915 257 aaPredicted RBP9.05□□□□□ -0.96
SMG6-216ENST00000575176 SLC8A3P57103 927 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 ENPP2Q13822 863 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 RAB6CQ53S08 254 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 C2CD6Q53TS8 623 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 EMC10Q5UCC4 262 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 BTBD8Q5XKL5 378 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 TMEM92Q6UXU6 159 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 KIAA0907Q7Z7F0 614 aaPredicted RBP9.05□□□□□ -0.96
SMG6-216ENST00000575176 LUZP1Q86V48 1076 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 RASSF3Q86WH2 238 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 DENND1CQ8IV53 801 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 ZNF683Q8IZ20 524 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMG6-216ENST00000575176 RPLP0P6Q8NHW5 317 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 ADAM32Q8TC27 787 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 PPP1R13BQ96KQ4 1090 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 PRMT1Q99873 361 aaKnown RBP9.05□□□□□ -0.96
SMG6-216ENST00000575176 DNAI2Q9GZS0 605 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 RAB6CQ9H0N0 254 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 NLRC4Q9NPP4 1024 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 OLA1Q9NTK5 396 aaKnown RBP9.05□□□□□ -0.96
SMG6-216ENST00000575176 ASNSD1Q9NWL6 643 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 TMEM59LQ9UK28 342 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 NEU3Q9UQ49 428 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 SLC27A6Q9Y2P4 619 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 STARD13Q9Y3M8 1113 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 DAAM1Q9Y4D1 1078 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 PCDHGA2Q9Y5H1 932 aa9.05□□□□□ -0.96
SMG6-216ENST00000575176 A0A1W2PQF6 199 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 FAM170AA1A519 330 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 KCNU1A8MYU2 1149 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 NEDD8-MDP1E9PL57 170 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 SGK1O00141 431 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 NCAM2O15394 837 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 LAMTOR5O43504 91 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 GFPT2O94808 682 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 LSM8O95777 96 aaKnown RBP9.04□□□□□ -0.96
SMG6-216ENST00000575176 TGM1P22735 817 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 FLT3P36888 993 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 SCNN1AP37088 669 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 USP8P40818 1118 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 ACADSBP45954 432 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 IRAK1P51617 712 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 COG7P83436 770 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 CDR2Q01850 454 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 CENPCQ03188 943 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 CSTF1Q05048 431 aaKnown RBP9.04□□□□□ -0.96
SMG6-216ENST00000575176 GAD2Q05329 585 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 PTK2Q05397 1052 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 GRSF1Q12849 480 aaKnown RBP eCLIP9.04□□□□□ -0.96
SMG6-216ENST00000575176 SRSF5Q13243 272 aaKnown RBP9.04□□□□□ -0.96
SMG6-216ENST00000575176 GEN1Q17RS7 908 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 FBXO43Q4G163 708 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 PIK3R6Q5UE93 754 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 TAF3Q5VWG9 929 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 EGFLAMQ63HQ2 1017 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 TPGS1Q6ZTW0 290 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 SYT13Q7L8C5 426 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 IRF2BP2Q7Z5L9 587 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 TADA2BQ86TJ2 420 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 NAT16Q8N8M0 369 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 ATOH1Q92858 354 aaPredicted RBP9.04□□□□□ -0.96
SMG6-216ENST00000575176 MYO19Q96H55 970 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms