RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 CFLARO15519 480 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 STAM2O75886 525 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 APOEP02649 317 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 APOC2P02655 101 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 APRTP07741 180 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 PORP16435 677 aaPredicted RBP14.86□□□□□ -0.03
SMG6-215ENST00000574501 OSBPP22059 807 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 ATP5OP48047 213 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 THOP1P52888 689 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 PKNOX1P55347 436 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 PHEXP78562 749 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 PSMD6Q15008 389 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 ITPRIPL1Q6GPH6 555 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 GPAT2Q6NUI2 795 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 POTEAQ6S8J7 498 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 PACS1Q6VY07 963 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 WDTC1Q8N5D0 677 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 AGR3Q8TD06 166 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 USP13Q92995 863 aaPredicted RBP14.86□□□□□ -0.03
SMG6-215ENST00000574501 LENG8Q96PV6 779 aaPredicted RBP14.86□□□□□ -0.03
SMG6-215ENST00000574501 CDRT15Q96T59 188 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 OXCT2Q9BYC2 517 aaPredicted RBP14.86□□□□□ -0.03
SMG6-215ENST00000574501 TUT1Q9H6E5 874 aaKnown RBP14.86□□□□□ -0.03
SMG6-215ENST00000574501 TBCCD1Q9NVR7 557 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 STK39Q9UEW8 545 aa14.86□□□□□ -0.03
SMG6-215ENST00000574501 NOP56O00567 594 aaKnown RBP14.85□□□□□ -0.03
SMG6-215ENST00000574501 ZNF195O14628 629 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 ADCY6O43306 1168 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 COL6A2P12110 1019 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 PSMC3P17980 439 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 CDK9P50750 372 aaKnown RBP14.85□□□□□ -0.03
SMG6-215ENST00000574501 BTG3Q14201 252 aaPredicted RBP14.85□□□□□ -0.03
SMG6-215ENST00000574501 PPM1LQ5SGD2 360 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 ELMSAN1Q6PJG2 1045 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 UNC5BQ8IZJ1 945 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 MPP5Q8N3R9 675 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 BHLHE22Q8NFJ8 381 aaPredicted RBP14.85□□□□□ -0.03
SMG6-215ENST00000574501 STN1Q9H668 368 aaKnown RBP14.85□□□□□ -0.03
SMG6-215ENST00000574501 CAAP1Q9H8G2 361 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 CLEC11AQ9Y240 323 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 LOXHD1Q8IVV2 1947 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 DGKIO75912 1065 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 KRT7P08729 469 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 GABRB2P47870 512 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 MS4A2Q01362 244 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 KLF10Q13118 480 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 GRAMD4Q6IC98 578 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 THNSL1Q8IYQ7 743 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 ADCY4Q8NFM4 1077 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 GSDMBQ8TAX9 411 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 DEPDC1BQ8WUY9 529 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 NLRP7Q8WX94 980 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 PPP1R36Q96LQ0 422 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 FRMD8P1Q9BZ68 369 aaPredicted RBP14.85□□□□□ -0.03
SMG6-215ENST00000574501 RNPEPQ9H4A4 650 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 RMI1Q9H9A7 625 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 PLGRKTQ9HBL7 147 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 DNAJC28Q9NX36 388 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 FAM198AQ9UFP1 575 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 EFR3BQ9Y2G0 817 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 RNF11Q9Y3C5 154 aa14.85□□□□□ -0.03
SMG6-215ENST00000574501 SLC15A5A6NIM6 579 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 TRDMT1O14717 391 aaKnown RBP14.84□□□□□ -0.03
SMG6-215ENST00000574501 CHADO15335 359 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 KCNN4O15554 427 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 FAM189A1O60320 539 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 ONECUT3O60422 494 aaPredicted RBP14.84□□□□□ -0.03
SMG6-215ENST00000574501 ACAT1P24752 427 aaKnown RBP14.84□□□□□ -0.03
SMG6-215ENST00000574501 GSTM4Q03013 218 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 PCLAFQ15004 111 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 HADHQ16836 314 aaKnown RBP14.84□□□□□ -0.03
SMG6-215ENST00000574501 SLC9B1Q4ZJI4 515 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 ZBTB41Q5SVQ8 909 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 CROCCP3Q8IVE0 287 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 NIPA2Q8N8Q9 360 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 KBTBD7Q8WVZ9 684 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 SLX1AQ9BQ83 275 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 RTKNQ9BST9 563 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 DCUN1D5Q9BTE7 237 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 COL20A1Q9P218 1284 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 RGS17Q9UGC6 210 aaPredicted RBP14.84□□□□□ -0.03
SMG6-215ENST00000574501 KANSL1LA0AUZ9 987 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 WDR64B1ANS9 1081 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 EXTL3O43909 919 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 KRT3P12035 628 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 ZNF23P17027 643 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 PTPN1P18031 435 aaKnown RBP14.84□□□□□ -0.03
SMG6-215ENST00000574501 EPHA3P29320 983 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 CRKP46108 304 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 NDST2P52849 883 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 OXCT1P55809 520 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 SEZ6Q53EL9 994 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 PRR5LQ6MZQ0 368 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 TAS1R3Q7RTX0 852 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 CPNE9Q8IYJ1 553 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 UBR7Q8N806 425 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 TTLL6Q8N841 843 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 TMEM35BQ8NCS4 154 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 CATSPER1Q8NEC5 780 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 OR5B17Q8NGF7 314 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms