RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 EIF4A3P38919 411 aaKnown RBP17.97■□□□□ 0.47
LITAF-212ENST00000573332 RNASE9P60153 205 aaKnown RBP17.97■□□□□ 0.47
LITAF-212ENST00000573332 PITX1P78337 314 aaPredicted RBP17.97■□□□□ 0.47
LITAF-212ENST00000573332 DHCR24Q15392 516 aa17.97■□□□□ 0.47
LITAF-212ENST00000573332 SLC25A52Q3SY17 297 aa17.97■□□□□ 0.47
LITAF-212ENST00000573332 PPP1R15BQ5SWA1 713 aa17.97■□□□□ 0.47
LITAF-212ENST00000573332 BNIPLQ7Z465 357 aa17.97■□□□□ 0.47
LITAF-212ENST00000573332 CPXM2Q8N436 756 aa17.97■□□□□ 0.47
LITAF-212ENST00000573332 TRIM11Q96F44 468 aa17.97■□□□□ 0.47
LITAF-212ENST00000573332 FCRL2Q96LA5 508 aaPredicted RBP17.97■□□□□ 0.47
LITAF-212ENST00000573332 NELL2Q99435 816 aa17.97■□□□□ 0.47
LITAF-212ENST00000573332 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.97■□□□□ 0.47
LITAF-212ENST00000573332 IRX2Q9BZI1 471 aaPredicted RBP17.97■□□□□ 0.47
LITAF-212ENST00000573332 C11orf16Q9NQ32 467 aa17.97■□□□□ 0.47
LITAF-212ENST00000573332 SPHK2Q9NRA0 654 aa17.97■□□□□ 0.47
LITAF-212ENST00000573332 METTL5Q9NRN9 209 aaKnown RBP17.97■□□□□ 0.47
LITAF-212ENST00000573332 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.97■□□□□ 0.47
LITAF-212ENST00000573332 COL4A2P08572 1712 aa17.97■□□□□ 0.47
LITAF-212ENST00000573332 TMCO5BA8MYB1 307 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 SPECC1L-ADORA2AF8WAN1 911 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 SCAMP3O14828 347 aaKnown RBP17.96■□□□□ 0.47
LITAF-212ENST00000573332 ENDOD1O94919 500 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 ADH1CP00326 375 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 F9P00740 461 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 MYBL1P10243 752 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 SLC2A3P11169 496 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 RRM1P23921 792 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 CTHP32929 405 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 GJA4P35212 333 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 MTA1Q13330 715 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 SLC18A3Q16572 532 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 OTUD1Q5VV17 481 aaPredicted RBP17.96■□□□□ 0.47
LITAF-212ENST00000573332 PLEKHA7Q6IQ23 1121 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 TRNP1Q6NT89 227 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 ALKBH5Q6P6C2 394 aaKnown RBP17.96■□□□□ 0.47
LITAF-212ENST00000573332 ZNF852Q6ZMS4 543 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 TPRG1Q6ZUI0 275 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.96■□□□□ 0.47
LITAF-212ENST00000573332 DENND1CQ8IV53 801 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 ADAM32Q8TC27 787 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 SELENOOQ9BVL4 669 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 OSBPL6Q9BZF3 934 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 DDIT4Q9NX09 232 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 MARK1Q9P0L2 795 aa17.96■□□□□ 0.47
LITAF-212ENST00000573332 KANSL1LA0AUZ9 987 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 C2CD4BA6NLJ0 364 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 PRR33A8MZF0 331 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 M0QYT0 321 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 GFRA2O00451 464 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 HOXC11O43248 304 aaPredicted RBP17.95■□□□□ 0.46
LITAF-212ENST00000573332 RFC1P35251 1148 aaPredicted RBP17.95■□□□□ 0.46
LITAF-212ENST00000573332 PTPN9P43378 593 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 GAD2Q05329 585 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 PPP2R5DQ14738 602 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 GAB4Q2WGN9 574 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 LY6G5CQ5SRR4 150 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 ADGRF1Q5T601 910 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 DNAJC24Q6P3W2 148 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 PHLDB2Q86SQ0 1253 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 JOSD2Q8TAC2 188 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 TTC8Q8TAM2 541 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 CHFRQ96EP1 664 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 CHP1Q99653 195 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 ADAM33Q9BZ11 813 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 FAM204AQ9H8W3 233 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 TBC1D17Q9HA65 648 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 PARVAQ9NVD7 372 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 IMPACTQ9P2X3 320 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 MRPS17Q9Y2R5 130 aaKnown RBP17.95■□□□□ 0.46
LITAF-212ENST00000573332 TECTAO75443 2155 aa17.95■□□□□ 0.46
LITAF-212ENST00000573332 KCNU1A8MYU2 1149 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 TRDMT1O14717 391 aaKnown RBP17.94■□□□□ 0.46
LITAF-212ENST00000573332 ACSL4O60488 711 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 PDGFBP01127 241 aaPredicted RBP17.94■□□□□ 0.46
LITAF-212ENST00000573332 PDGFRAP16234 1089 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 FECHP22830 423 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 CCR1P32246 355 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 EIF2DP41214 584 aaKnown RBP17.94■□□□□ 0.46
LITAF-212ENST00000573332 SOX9P48436 509 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 SLC11A2P49281 568 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 CXCR3P49682 368 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 SULT1E1P49888 294 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 CLCN5P51795 746 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 MAMLD1Q13495 774 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 ZC3H12AQ5D1E8 599 aaKnown RBP17.94■□□□□ 0.46
LITAF-212ENST00000573332 TMEM31Q5JXX7 168 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 TMEM25Q86YD3 366 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 ZNF687Q8N1G0 1237 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 EMC1Q8N766 993 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 RXFP2Q8WXD0 754 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 FAM3CQ92520 227 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 EXOC4Q96A65 974 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 PBXIP1Q96AQ6 731 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 PANX2Q96RD6 677 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 TBCBQ99426 244 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 MFSD1Q9H3U5 465 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 NHEJ1Q9H9Q4 299 aaPredicted RBP17.94■□□□□ 0.46
LITAF-212ENST00000573332 LTB4R2Q9NPC1 389 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 CALCOCO1Q9P1Z2 691 aa17.94■□□□□ 0.46
LITAF-212ENST00000573332 APOEP02649 317 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms