RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 PMLP29590 882 aa18.95■□□□□ 0.62
CHD3-214ENST00000572579 RGS7P49802 495 aa18.95■□□□□ 0.62
CHD3-214ENST00000572579 STX17P56962 302 aa18.95■□□□□ 0.62
CHD3-214ENST00000572579 ENPP2Q13822 863 aa18.95■□□□□ 0.62
CHD3-214ENST00000572579 PEAR1Q5VY43 1037 aaPredicted RBP18.95■□□□□ 0.62
CHD3-214ENST00000572579 RSRC2Q7L4I2 434 aaKnown RBP18.95■□□□□ 0.62
CHD3-214ENST00000572579 RRAGAQ7L523 313 aa18.95■□□□□ 0.62
CHD3-214ENST00000572579 FMNL3Q8IVF7 1028 aa18.95■□□□□ 0.62
CHD3-214ENST00000572579 SLC41A1Q8IVJ1 513 aa18.95■□□□□ 0.62
CHD3-214ENST00000572579 CLEC4CQ8WTT0 213 aa18.95■□□□□ 0.62
CHD3-214ENST00000572579 DDX1Q92499 740 aaKnown RBP18.95■□□□□ 0.62
CHD3-214ENST00000572579 KREMEN1Q96MU8 473 aa18.95■□□□□ 0.62
CHD3-214ENST00000572579 DNAI2Q9GZS0 605 aa18.95■□□□□ 0.62
CHD3-214ENST00000572579 LRRC4Q9HBW1 653 aa18.95■□□□□ 0.62
CHD3-214ENST00000572579 EVLQ9UI08 416 aaPredicted RBP18.95■□□□□ 0.62
CHD3-214ENST00000572579 ZNF510Q9Y2H8 683 aa18.95■□□□□ 0.62
CHD3-214ENST00000572579 STON1Q9Y6Q2 735 aa18.95■□□□□ 0.62
CHD3-214ENST00000572579 ATXN2Q99700 1313 aaKnown RBP18.95■□□□□ 0.62
CHD3-214ENST00000572579 MSI1O43347 362 aaKnown RBP18.94■□□□□ 0.62
CHD3-214ENST00000572579 PAEPP09466 180 aa18.94■□□□□ 0.62
CHD3-214ENST00000572579 BRD2P25440 801 aaKnown RBP18.94■□□□□ 0.62
CHD3-214ENST00000572579 CHKAP35790 457 aa18.94■□□□□ 0.62
CHD3-214ENST00000572579 IL12RB1P42701 662 aa18.94■□□□□ 0.62
CHD3-214ENST00000572579 SGSHP51688 502 aa18.94■□□□□ 0.62
CHD3-214ENST00000572579 ZNF132P52740 706 aa18.94■□□□□ 0.62
CHD3-214ENST00000572579 DAOAP59103 153 aa18.94■□□□□ 0.62
CHD3-214ENST00000572579 CNGA2Q16280 664 aa18.94■□□□□ 0.62
CHD3-214ENST00000572579 TRIM61Q5EBN2 209 aa18.94■□□□□ 0.62
CHD3-214ENST00000572579 SPDYCQ5MJ68 293 aa18.94■□□□□ 0.62
CHD3-214ENST00000572579 NUDT18Q6ZVK8 323 aa18.94■□□□□ 0.62
CHD3-214ENST00000572579 SYT12Q8IV01 421 aa18.94■□□□□ 0.62
CHD3-214ENST00000572579 TRIM59Q8IWR1 403 aa18.94■□□□□ 0.62
CHD3-214ENST00000572579 CPXM2Q8N436 756 aa18.94■□□□□ 0.62
CHD3-214ENST00000572579 SPACA7Q96KW9 195 aa18.94■□□□□ 0.62
CHD3-214ENST00000572579 DCLK3Q9C098 648 aa18.94■□□□□ 0.62
CHD3-214ENST00000572579 MKRN2Q9H000 416 aaKnown RBP18.94■□□□□ 0.62
CHD3-214ENST00000572579 THAP10Q9P2Z0 257 aaPredicted RBP18.94■□□□□ 0.62
CHD3-214ENST00000572579 KIAA1257Q9ULG3 409 aa18.94■□□□□ 0.62
CHD3-214ENST00000572579 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.94■□□□□ 0.62
CHD3-214ENST00000572579 CTNND2Q9UQB3 1225 aa18.94■□□□□ 0.62
CHD3-214ENST00000572579 PCDHB4Q9Y5E5 795 aa18.94■□□□□ 0.62
CHD3-214ENST00000572579 THADAQ6YHU6 1953 aa18.93■□□□□ 0.62
CHD3-214ENST00000572579 ZFHX4Q86UP3 3567 aa18.93■□□□□ 0.62
CHD3-214ENST00000572579 FYNP06241 537 aa18.93■□□□□ 0.62
CHD3-214ENST00000572579 LCP1P13796 627 aa18.93■□□□□ 0.62
CHD3-214ENST00000572579 TBXAS1P24557 533 aaPredicted RBP18.93■□□□□ 0.62
CHD3-214ENST00000572579 FUT11Q495W5 492 aa18.93■□□□□ 0.62
CHD3-214ENST00000572579 LYSMD4Q5XG99 296 aa18.93■□□□□ 0.62
CHD3-214ENST00000572579 PSAPL1Q6NUJ1 521 aa18.93■□□□□ 0.62
CHD3-214ENST00000572579 FOXR2Q6PJQ5 311 aa18.93■□□□□ 0.62
CHD3-214ENST00000572579 SCML4Q8N228 414 aa18.93■□□□□ 0.62
CHD3-214ENST00000572579 EHBP1Q8NDI1 1231 aa18.93■□□□□ 0.62
CHD3-214ENST00000572579 GTPBP4Q9BZE4 634 aaKnown RBP18.93■□□□□ 0.62
CHD3-214ENST00000572579 HESX1Q9UBX0 185 aa18.93■□□□□ 0.62
CHD3-214ENST00000572579 STOML2Q9UJZ1 356 aa18.93■□□□□ 0.62
CHD3-214ENST00000572579 STRIP2Q9ULQ0 834 aa18.93■□□□□ 0.62
CHD3-214ENST00000572579 CYP8B1Q9UNU6 501 aa18.93■□□□□ 0.62
CHD3-214ENST00000572579 FRYQ5TBA9 3013 aa18.93■□□□□ 0.62
CHD3-214ENST00000572579 TSPAN3O60637 253 aa18.92■□□□□ 0.62
CHD3-214ENST00000572579 SETSIPP0DME0 302 aa18.92■□□□□ 0.62
CHD3-214ENST00000572579 HOXD9P28356 352 aaPredicted RBP18.92■□□□□ 0.62
CHD3-214ENST00000572579 SLC8A3P57103 927 aa18.92■□□□□ 0.62
CHD3-214ENST00000572579 YWHAEP62258 255 aaKnown RBP18.92■□□□□ 0.62
CHD3-214ENST00000572579 RPL6Q02878 288 aaKnown RBP18.92■□□□□ 0.62
CHD3-214ENST00000572579 KCNH2Q12809 1159 aa18.92■□□□□ 0.62
CHD3-214ENST00000572579 CCDC40Q4G0X9 1142 aa18.92■□□□□ 0.62
CHD3-214ENST00000572579 SLC23A3Q6PIS1 610 aa18.92■□□□□ 0.62
CHD3-214ENST00000572579 PPM1KQ8N3J5 372 aa18.92■□□□□ 0.62
CHD3-214ENST00000572579 PLD4Q96BZ4 506 aa18.92■□□□□ 0.62
CHD3-214ENST00000572579 MYEOVQ96EZ4 313 aa18.92■□□□□ 0.62
CHD3-214ENST00000572579 NT5C1BQ96P26 610 aa18.92■□□□□ 0.62
CHD3-214ENST00000572579 IPO9Q96P70 1041 aaKnown RBP18.92■□□□□ 0.62
CHD3-214ENST00000572579 CNGB3Q9NQW8 809 aa18.92■□□□□ 0.62
CHD3-214ENST00000572579 ELOVL2Q9NXB9 296 aa18.92■□□□□ 0.62
CHD3-214ENST00000572579 HOOK1Q9UJC3 728 aaKnown RBP18.92■□□□□ 0.62
CHD3-214ENST00000572579 CNTN6Q9UQ52 1028 aa18.92■□□□□ 0.62
CHD3-214ENST00000572579 GOLGA6L7A0A1B0GV03 622 aa18.91■□□□□ 0.62
CHD3-214ENST00000572579 IGLV3-27P01718 113 aa18.91■□□□□ 0.62
CHD3-214ENST00000572579 PRKCHP24723 683 aa18.91■□□□□ 0.62
CHD3-214ENST00000572579 HLA-FP30511 346 aa18.91■□□□□ 0.62
CHD3-214ENST00000572579 MARSP56192 900 aaKnown RBP18.91■□□□□ 0.62
CHD3-214ENST00000572579 ZNF33AQ06730 810 aa18.91■□□□□ 0.62
CHD3-214ENST00000572579 STIM1Q13586 685 aa18.91■□□□□ 0.62
CHD3-214ENST00000572579 BYSLQ13895 437 aaKnown RBP18.91■□□□□ 0.62
CHD3-214ENST00000572579 SH3PXD2AQ5TCZ1 1133 aa18.91■□□□□ 0.62
CHD3-214ENST00000572579 SDE2Q6IQ49 451 aa18.91■□□□□ 0.62
CHD3-214ENST00000572579 DDI1Q8WTU0 396 aa18.91■□□□□ 0.62
CHD3-214ENST00000572579 ZNF419Q96HQ0 510 aaPredicted RBP18.91■□□□□ 0.62
CHD3-214ENST00000572579 SRRTQ9BXP5 876 aaKnown RBP18.91■□□□□ 0.62
CHD3-214ENST00000572579 CAPN10Q9HC96 672 aa18.91■□□□□ 0.62
CHD3-214ENST00000572579 ACP6Q9NPH0 428 aa18.91■□□□□ 0.62
CHD3-214ENST00000572579 TMEM9BQ9NQ34 198 aa18.91■□□□□ 0.62
CHD3-214ENST00000572579 WASF3Q9UPY6 502 aa18.91■□□□□ 0.62
CHD3-214ENST00000572579 HBS1LQ9Y450 684 aaKnown RBP18.91■□□□□ 0.62
CHD3-214ENST00000572579 NUP205Q92621 2012 aa18.91■□□□□ 0.62
CHD3-214ENST00000572579 ASPMQ8IZT6 3477 aa18.91■□□□□ 0.62
CHD3-214ENST00000572579 SPEGQ15772 3267 aa18.9■□□□□ 0.62
CHD3-214ENST00000572579 KCNJ18B7U540 433 aa18.9■□□□□ 0.62
CHD3-214ENST00000572579 P4HA2O15460 535 aa18.9■□□□□ 0.62
CHD3-214ENST00000572579 ENGP17813 658 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms