RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 PLD4Q96BZ4 506 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 MYEOVQ96EZ4 313 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 PPP1R13BQ96KQ4 1090 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 FCRL2Q96LA5 508 aaPredicted RBP10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 DCLK3Q9C098 648 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 DNAJC17Q9NVM6 304 aaKnown RBP10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 DEC1Q9P2X7 70 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 XPO7Q9UIA9 1087 aaKnown RBP10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 FBXO10Q9UK96 956 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 ZNF510Q9Y2H8 683 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 HBS1LQ9Y450 684 aaKnown RBP10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 PCDHGA2Q9Y5H1 932 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 ZFHX2Q9C0A1 2572 aaPredicted RBP10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 TBC1D3BA6NDS4 549 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 SGK1O00141 431 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 ADAM23O75077 832 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 ATG13O75143 517 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 GFPT2O94808 682 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 KLF8O95600 359 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 PENKP01210 267 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 LMNAP02545 664 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 CHRNB2P17787 502 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 SLC6A4P31645 630 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 TNFRSF4P43489 277 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 TBX4P57082 545 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 UBXN1Q04323 297 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 EIF4EBP2Q13542 120 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 LPAL2Q16609 132 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 FKBP15Q5T1M5 1219 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 NADSYN1Q6IA69 706 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 OR6B2Q6IFH4 312 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 RFWD3Q6PCD5 774 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 SYT13Q7L8C5 426 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 TAC4Q86UU9 113 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 DEFB106AQ8N104 65 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 CPXM2Q8N436 756 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 TERB1Q8NA31 727 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 TXNDC5Q8NBS9 432 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 EXOC4Q96A65 974 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 ERLEC1Q96DZ1 483 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 SLC39A13Q96H72 371 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 NAP1L5Q96NT1 182 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 ACOX2Q99424 681 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 BPIFA3Q9BQP9 254 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 ADAM33Q9BZ11 813 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 WDR35Q9P2L0 1181 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 SLC8A2Q9UPR5 921 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 SDK1Q7Z5N4 2213 aa10.67□□□□□ -0.7
GTF3C1-213ENST00000571886 ABCA7Q8IZY2 2146 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 IGLV3-25P01717 112 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 HOXA6P31267 233 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 CDH5P33151 784 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 SOX5P35711 763 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 CHKAP35790 457 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 WASP42768 502 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 HARS2P49590 506 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 DGKGP49619 791 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 ZNF165P49910 485 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 NRLP54845 237 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 BPIFB4P59827 614 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 YWHAZP63104 245 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 MRPS21P82921 87 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 GEN1Q17RS7 908 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 FAM133BQ5BKY9 247 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 C10orf76Q5T2E6 689 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 EGFLAMQ63HQ2 1017 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 GRAMD4Q6IC98 578 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 ZC3H14Q6PJT7 736 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 OLFML1Q6UWY5 402 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 WDR5BQ86VZ2 330 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 LONP2Q86WA8 852 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 WFDC5Q8TCV5 224 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 EPS8L1Q8TE68 723 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 CPA5Q8WXQ8 436 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 PCMTD1Q96MG8 357 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 SLC2A13Q96QE2 648 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 XPO6Q96QU8 1125 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 ERGIC2Q96RQ1 377 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 PCDHB18PQ96TA0 734 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 FAM126AQ9BYI3 521 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 POPDC2Q9HBU9 364 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 CBX8Q9HC52 389 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 RTN4Q9NQC3 1192 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 CALCOCO1Q9P1Z2 691 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 STOML2Q9UJZ1 356 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 NOCTQ9UK39 431 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 MMP17Q9ULZ9 603 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 INVSQ9Y283 1065 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 FRYLO94915 3013 aa10.66□□□□□ -0.7
GTF3C1-213ENST00000571886 ZNF292O60281 2723 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 SMTNL1A8MU46 457 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 WASH3PC4AMC7 463 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 ACSL4O60488 711 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 TRUB2O95900 331 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 TPM2P07951 284 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 TFE3P19532 575 aaPredicted RBP10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 HOXD9P28356 352 aaPredicted RBP10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 NOMO3P69849 1222 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 FMO1Q01740 532 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms