RNA–Protein interactions for RNA: ENST00000571714.5

NPLOC4-206, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-206ENST00000571714 ZNF132P52740 706 aa11.69□□□□□ -0.54
NPLOC4-206ENST00000571714 PPP1R26Q5T8A7 1209 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-206ENST00000571714 DBX2Q6ZNG2 339 aa11.69□□□□□ -0.54
NPLOC4-206ENST00000571714 MARCH9Q86YJ5 346 aa11.69□□□□□ -0.54
NPLOC4-206ENST00000571714 TMPRSS6Q8IU80 811 aa11.69□□□□□ -0.54
NPLOC4-206ENST00000571714 TMC2Q8TDI7 906 aa11.69□□□□□ -0.54
NPLOC4-206ENST00000571714 TAS1R2Q8TE23 839 aa11.69□□□□□ -0.54
NPLOC4-206ENST00000571714 SORCS1Q8WY21 1168 aa11.69□□□□□ -0.54
NPLOC4-206ENST00000571714 ZNF396Q96N95 335 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-206ENST00000571714 NT5C1AQ9BXI3 368 aa11.69□□□□□ -0.54
NPLOC4-206ENST00000571714 CCDC86Q9H6F5 360 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-206ENST00000571714 GAREM1Q9H706 876 aa11.69□□□□□ -0.54
NPLOC4-206ENST00000571714 TM7SF3Q9NS93 570 aa11.69□□□□□ -0.54
NPLOC4-206ENST00000571714 CLIC5Q9NZA1 410 aa11.69□□□□□ -0.54
NPLOC4-206ENST00000571714 KIAA1522Q9P206 1035 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-206ENST00000571714 RASAL2Q9UJF2 1139 aa11.69□□□□□ -0.54
NPLOC4-206ENST00000571714 AGO1Q9UL18 857 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-206ENST00000571714 PCDHA7Q9UN72 937 aa11.69□□□□□ -0.54
NPLOC4-206ENST00000571714 PDXKO00764 312 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 IKBKBO14920 756 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 NPC1O15118 1278 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 BCAT2O15382 392 aaPredicted RBP11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 HMBSP08397 361 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 TRIM49P0CI25 452 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 TRIM49CP0CI26 452 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 CD58P19256 250 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 PSEN1P49768 467 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 PPP3CAQ08209 521 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 EFEMP1Q12805 493 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 HLA-BQ31612 363 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 KMT5BQ4FZB7 885 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 TMPRSS7Q7RTY8 843 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 ANKS1BQ7Z6G8 1248 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 FAM217AQ8IXS0 508 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 SPRYD3Q8NCJ5 442 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 SETD7Q8WTS6 366 aaKnown RBP11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 PRCCQ92733 491 aaPredicted RBP11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 SIPA1Q96FS4 1042 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 BBC3Q96PG8 261 aaPredicted RBP11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 DUSP16Q9BY84 665 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 ELOVL2Q9NXB9 296 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 SERTAD1Q9UHV2 236 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 EIF2B4Q9UI10 523 aaKnown RBP11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 APOBEC2Q9Y235 224 aaKnown RBP11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 BTBD3Q9Y2F9 522 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 RAXQ9Y2V3 346 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 IGSF10Q6WRI0 2623 aa11.68□□□□□ -0.54
NPLOC4-206ENST00000571714 MYH10P35580 1976 aa11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 A0A1B0GVT2 93 aa11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 K7ELQ4 463 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 SYNCRIPO60506 623 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 CER1O95813 267 aa11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 ATXN1LP0C7T5 689 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 C7P10643 843 aa11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 HLA-EP13747 358 aa11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 OXTRP30559 389 aa11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 CHKAP35790 457 aa11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 MATKP42679 507 aa11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 GCLMP48507 274 aa11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 EIF4HQ15056 248 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 FOXD4L6Q3SYB3 417 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 FOXD4L5Q5VV16 416 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 CEP135Q66GS9 1140 aa11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 FOXD4L3Q6VB84 417 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 BHLHA9Q7RTU4 235 aa11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 TADA2BQ86TJ2 420 aa11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 DENND1CQ8IV53 801 aa11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 CPXM2Q8N436 756 aa11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 FOXD4L4Q8WXT5 416 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 PAGE5Q96GU1 130 aa11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 NIF3L1Q9GZT8 377 aa11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 C6orf106Q9H6K1 298 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 CYP3A43Q9HB55 503 aa11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 ZNF510Q9Y2H8 683 aa11.67□□□□□ -0.54
NPLOC4-206ENST00000571714 FLRT2O43155 660 aa11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 EPHX1P07099 455 aa11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 SLFN14P0C7P3 912 aa11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 RALAP11233 206 aa11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 HOXD9P28356 352 aaPredicted RBP11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 ACSL1P33121 698 aa11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 ME1P48163 572 aa11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 CSNK1EP49674 416 aaKnown RBP11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 VAMP7P51809 220 aa11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 COG7P83436 770 aa11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 CAMK2BQ13554 666 aa11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 CAMK2GQ13555 558 aaPredicted RBP11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 KIF19Q2TAC6 998 aa11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 ZNF394Q53GI3 561 aa11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 RAB41Q5JT25 222 aa11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 IL27RAQ6UWB1 636 aa11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 LAYNQ6UX15 382 aa11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 SERPINA13PQ6UXR4 307 aa11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 FAM124AQ86V42 546 aa11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 PIGZQ86VD9 579 aa11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 ZC3H3Q8IXZ2 948 aaKnown RBP11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 ZNF366Q8N895 744 aa11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 UCMAQ8WVF2 138 aa11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 CDK5RAP1Q96SZ6 601 aaKnown RBP11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 NUP58Q9BVL2 599 aa11.66□□□□□ -0.54
NPLOC4-206ENST00000571714 DCLK3Q9C098 648 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms