RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 HTATSF1O43719 755 aaKnown RBP4.81□□□□□ -1.64
NUP88-202ENST00000570937 RASSF9O75901 435 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 ACVR2AP27037 513 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 TIAL1Q01085 375 aaKnown RBP eCLIP4.81□□□□□ -1.64
NUP88-202ENST00000570937 TEFQ10587 303 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 ARHGEF7Q14155 803 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 WDR43Q15061 677 aaKnown RBP eCLIP4.81□□□□□ -1.64
NUP88-202ENST00000570937 PROSER3Q2NL68 480 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 ZNF750Q32MQ0 723 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 FCRL6Q6DN72 434 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 PPP4R4Q6NUP7 873 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 YAF2Q8IY57 180 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 SRRM1Q8IYB3 904 aaKnown RBP4.81□□□□□ -1.64
NUP88-202ENST00000570937 TTC5Q8N0Z6 440 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 FANCBQ8NB91 859 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 ABHD11Q8NFV4 315 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 TMEM171Q8WVE6 324 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 DPF1Q92782 380 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 PHKBQ93100 1093 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 TIFAQ96CG3 184 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 STRBPQ96SI9 672 aaKnown RBP4.81□□□□□ -1.64
NUP88-202ENST00000570937 STK31Q9BXU1 1019 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 UNKQ9C0B0 810 aaKnown RBP4.81□□□□□ -1.64
NUP88-202ENST00000570937 CHST8Q9H2A9 424 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 FAM83DQ9H4H8 585 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 PRKRIP1Q9H875 184 aaPredicted RBP4.81□□□□□ -1.64
NUP88-202ENST00000570937 CHPF2Q9P2E5 772 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 CAPN11Q9UMQ6 739 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 TBC1D30Q9Y2I9 924 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 SRCAPQ6ZRS2 3230 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 SBF2Q86WG5 1849 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 RGPD3A6NKT7 1758 aaPredicted RBP4.81□□□□□ -1.64
NUP88-202ENST00000570937 RGPD4Q7Z3J3 1758 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 MANSC4A6NHS7 340 aaPredicted RBP4.8□□□□□ -1.64
NUP88-202ENST00000570937 H7C4K7 107 aa4.8□□□□□ -1.64
NUP88-202ENST00000570937 RNMTO43148 476 aaKnown RBP4.8□□□□□ -1.64
NUP88-202ENST00000570937 RRP9O43818 475 aaKnown RBP4.8□□□□□ -1.64
NUP88-202ENST00000570937 LATS1O95835 1130 aa4.8□□□□□ -1.64
NUP88-202ENST00000570937 EPHA3P29320 983 aa4.8□□□□□ -1.64
NUP88-202ENST00000570937 PRKAR1BP31321 381 aa4.8□□□□□ -1.64
NUP88-202ENST00000570937 PTDSS1P48651 473 aaKnown RBP4.8□□□□□ -1.64
NUP88-202ENST00000570937 CPT1AP50416 773 aa4.8□□□□□ -1.64
NUP88-202ENST00000570937 CYP4F2P78329 520 aa4.8□□□□□ -1.64
NUP88-202ENST00000570937 LMOD3Q0VAK6 560 aa4.8□□□□□ -1.64
NUP88-202ENST00000570937 SLC29A2Q14542 456 aa4.8□□□□□ -1.64
NUP88-202ENST00000570937 KIAA1614Q5VZ46 1190 aa4.8□□□□□ -1.64
NUP88-202ENST00000570937 RAB11FIP4Q86YS3 637 aa4.8□□□□□ -1.64
NUP88-202ENST00000570937 DNAJB14Q8TBM8 379 aa4.8□□□□□ -1.64
NUP88-202ENST00000570937 LENG8Q96PV6 779 aaPredicted RBP4.8□□□□□ -1.64
NUP88-202ENST00000570937 DPCDQ9BVM2 203 aaPredicted RBP4.8□□□□□ -1.64
NUP88-202ENST00000570937 VN1R3Q9BXE9 311 aa4.8□□□□□ -1.64
NUP88-202ENST00000570937 TEX13AQ9BXU3 409 aaPredicted RBP4.8□□□□□ -1.64
NUP88-202ENST00000570937 TRIM36Q9NQ86 728 aa4.8□□□□□ -1.64
NUP88-202ENST00000570937 FLRT1Q9NZU1 646 aa4.8□□□□□ -1.64
NUP88-202ENST00000570937 DKK4Q9UBT3 224 aa4.8□□□□□ -1.64
NUP88-202ENST00000570937 MID2Q9UJV3 735 aa4.8□□□□□ -1.64
NUP88-202ENST00000570937 ASAP1Q9ULH1 1129 aa4.8□□□□□ -1.64
NUP88-202ENST00000570937 DRG1Q9Y295 367 aaKnown RBP4.8□□□□□ -1.64
NUP88-202ENST00000570937 PCDHGB6Q9Y5F9 930 aa4.8□□□□□ -1.64
NUP88-202ENST00000570937 KAT6BQ8WYB5 2073 aa4.8□□□□□ -1.64
NUP88-202ENST00000570937 PKD1L3Q7Z443 1732 aa4.8□□□□□ -1.64
NUP88-202ENST00000570937 MAP3K5Q99683 1374 aa4.79□□□□□ -1.64
NUP88-202ENST00000570937 AQP7P3A6NL99 342 aa4.79□□□□□ -1.64
NUP88-202ENST00000570937 H7C1Q1 480 aa4.79□□□□□ -1.64
NUP88-202ENST00000570937 SRGAP2O75044 1071 aa4.79□□□□□ -1.64
NUP88-202ENST00000570937 INMTO95050 263 aa4.79□□□□□ -1.64
NUP88-202ENST00000570937 VNN1O95497 513 aa4.79□□□□□ -1.64
NUP88-202ENST00000570937 STARD3NLO95772 234 aa4.79□□□□□ -1.64
NUP88-202ENST00000570937 MT-ND5P03915 603 aa4.79□□□□□ -1.64
NUP88-202ENST00000570937 MYCLP12524 364 aaPredicted RBP4.79□□□□□ -1.64
NUP88-202ENST00000570937 BTF3P20290 206 aaKnown RBP4.79□□□□□ -1.64
NUP88-202ENST00000570937 UQCRC1P31930 480 aa4.79□□□□□ -1.64
NUP88-202ENST00000570937 GKP32189 559 aa4.79□□□□□ -1.64
NUP88-202ENST00000570937 TIRAPP58753 221 aa4.79□□□□□ -1.64
NUP88-202ENST00000570937 HTRA4P83105 476 aaPredicted RBP4.79□□□□□ -1.64
NUP88-202ENST00000570937 HOXA4Q00056 320 aaPredicted RBP4.79□□□□□ -1.64
NUP88-202ENST00000570937 SLC10A2Q12908 348 aaPredicted RBP4.79□□□□□ -1.64
NUP88-202ENST00000570937 CACHD1Q5VU97 1274 aa4.79□□□□□ -1.64
NUP88-202ENST00000570937 KCTD20Q7Z5Y7 419 aa4.79□□□□□ -1.64
NUP88-202ENST00000570937 SDR16C5Q8N3Y7 309 aa4.79□□□□□ -1.64
NUP88-202ENST00000570937 PNISRQ8TF01 805 aaKnown RBP4.79□□□□□ -1.64
NUP88-202ENST00000570937 IPCEF1Q8WWN9 437 aaPredicted RBP4.79□□□□□ -1.64
NUP88-202ENST00000570937 ZNF668Q96K58 619 aaPredicted RBP4.79□□□□□ -1.64
NUP88-202ENST00000570937 PRR25Q96S07 402 aa4.79□□□□□ -1.64
NUP88-202ENST00000570937 BRIP1Q9BX63 1249 aa4.79□□□□□ -1.64
NUP88-202ENST00000570937 SH3BP4Q9P0V3 963 aa4.79□□□□□ -1.64
NUP88-202ENST00000570937 COL3A1P02461 1466 aaPredicted RBP4.79□□□□□ -1.64
NUP88-202ENST00000570937 BTAF1O14981 1849 aa4.79□□□□□ -1.64
NUP88-202ENST00000570937 PSMD9O00233 223 aa4.78□□□□□ -1.64
NUP88-202ENST00000570937 PMPCBO75439 489 aa4.78□□□□□ -1.64
NUP88-202ENST00000570937 RASAL1O95294 804 aa4.78□□□□□ -1.64
NUP88-202ENST00000570937 IL1R2P27930 398 aa4.78□□□□□ -1.64
NUP88-202ENST00000570937 RFC4P35249 363 aa4.78□□□□□ -1.64
NUP88-202ENST00000570937 CARSP49589 748 aaKnown RBP4.78□□□□□ -1.64
NUP88-202ENST00000570937 E2F1Q01094 437 aa4.78□□□□□ -1.64
NUP88-202ENST00000570937 HLTFQ14527 1009 aaKnown RBP eCLIP4.78□□□□□ -1.64
NUP88-202ENST00000570937 TAF7Q15545 349 aaPredicted RBP4.78□□□□□ -1.64
NUP88-202ENST00000570937 NAPRTQ6XQN6 538 aa4.78□□□□□ -1.64
NUP88-202ENST00000570937 TRIM72Q6ZMU5 477 aa4.78□□□□□ -1.64
NUP88-202ENST00000570937 UNC13DQ70J99 1090 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms