RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 AFPP02771 609 aaKnown RBP12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 KLKB1P03952 638 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 HOXB2P14652 356 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 NTSR1P30989 418 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 MARSP56192 900 aaKnown RBP12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 GCNT1Q02742 428 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 CREB5Q02930 508 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 KCNH2Q12809 1159 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 SF3A2Q15428 464 aaKnown RBP12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 STILQ15468 1287 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 EGFLAMQ63HQ2 1017 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 PMS2CLQ68D20 193 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 PM20D1Q6GTS8 502 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 SDE2Q6IQ49 451 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 LCLAT1Q6UWP7 414 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 RRAGAQ7L523 313 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 DENND1CQ8IV53 801 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 TRIM59Q8IWR1 403 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 CHPFQ8IZ52 775 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 RBBP8NLQ8NC74 664 aaPredicted RBP12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 KCTD13Q8WZ19 329 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 KAT5Q92993 513 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 PLD4Q96BZ4 506 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 SRRTQ9BXP5 876 aaKnown RBP12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 SMOC1Q9H4F8 434 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 SLC24A3Q9HC58 644 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 PLK2Q9NYY3 685 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 STARD13Q9Y3M8 1113 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 DCDC2BA2VCK2 349 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 PENKP01210 267 aaPredicted RBP12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 CYBBP04839 570 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 LCP1P13796 627 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 BCKDHBP21953 392 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 BRD2P25440 801 aaKnown RBP12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 WASP42768 502 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 HARS2P49590 506 aaKnown RBP12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 BYSLQ13895 437 aaKnown RBP12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 CAMK4Q16566 473 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 PKDCCQ504Y2 493 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 PLA2G2CQ5R387 149 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 BSPRYQ5W0U4 402 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 IL31Q6EBC2 164 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 TOGARAM2Q6ZUX3 1019 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 BHLHA9Q7RTU4 235 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 CYP2U1Q7Z449 544 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 FMNL3Q8IVF7 1028 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 ARHGEF19Q8IW93 802 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 EHBP1Q8NDI1 1231 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 OLIG1Q8TAK6 271 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 LMO3Q8TAP4 145 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 TFAP2BQ92481 460 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 NDRG1Q92597 394 aaKnown RBP12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 EDEM1Q92611 657 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 INTS2Q9H0H0 1204 aaKnown RBP12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 CNGB3Q9NQW8 809 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 CHMP5Q9NZZ3 219 aa12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 AGO1Q9UL18 857 aaKnown RBP12.93□□□□□ -0.34
CTDNEP1-205ENST00000570828 ATG2BQ96BY7 2078 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 BCLAF3A2AJT9 711 aaKnown RBP12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 YJEFN3A6XGL0 299 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 PRRT4C9JH25 899 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 E7ENQ6 273 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 CAVIN2O95810 425 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 KRT5P13647 590 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 P2RY2P41231 377 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 DHPSP49366 369 aaPredicted RBP12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 RGS7P49802 495 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 LIMK1P53667 647 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 DAOAP59103 153 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 CNGA2Q16280 664 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 FYB2Q5VWT5 728 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 LPCAT2Q7L5N7 544 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 SCML4Q8N228 414 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 RLN3Q8WXF3 142 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 GOLGA1Q92805 767 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 ABCC13Q9NSE7 274 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 RWDD2AQ9UIY3 292 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 HBS1LQ9Y450 684 aaKnown RBP12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 MYH10P35580 1976 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 KIAA1549LQ6ZVL6 1849 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 SPTBN2O15020 2390 aa12.92□□□□□ -0.34
CTDNEP1-205ENST00000570828 SDK1Q7Z5N4 2213 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 RNF225M0QZC1 329 aaPredicted RBP12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 CISD3P0C7P0 127 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 GABRG2P18507 467 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 ZNF132P52740 706 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 MFAP3P55082 362 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 TRIP4Q15650 581 aaPredicted RBP12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 TCEAL6Q6IPX3 200 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 PMF1Q6P1K2 205 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 ANKS1BQ7Z6G8 1248 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 CREBRFQ8IUR6 639 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 CPXM2Q8N436 756 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 DDI1Q8WTU0 396 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 SLC35F5Q8WV83 523 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 IRGQQ8WZA9 623 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 DDX1Q92499 740 aaKnown RBP12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 TCEAL3Q969E4 200 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 HSFY1Q96LI6 401 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms