RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-222	ENST00000570139	ZSCAN23	Q3MJ62	389 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	ZNF280D	Q6N043	979 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	MZT2B	Q6NZ67	158 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	ERO1B	Q86YB8	467 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	ELOA2	Q8IYF1	753 aa	Predicted RBP	7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	FAM26E	Q8N5C1	309 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	STPG3	Q8N7X2	389 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	PIK3C3	Q8NEB9	887 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	SLC30A5	Q8TAD4	765 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	ABHD4	Q8TB40	342 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	FAM71B	Q8TC56	605 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	ZKSCAN4	Q969J2	545 aa	Predicted RBP	7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	C18orf8	Q96DM3	657 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	AK8	Q96MA6	479 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	TIGD1	Q96MW7	591 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	CLIC6	Q96NY7	704 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	KRTAP4-12	Q9BQ66	201 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	FAM167B	Q9BTA0	163 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	RAB34	Q9BZG1	259 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	RNF32	Q9H0A6	362 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	CPVL	Q9H3G5	476 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	SLC38A10	Q9HBR0	1119 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	KLHL14	Q9P2G3	628 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	SLC13A4	Q9UKG4	626 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	AFG3L2	Q9Y4W6	797 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	ZHX2	Q9Y6X8	837 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	POLR2A	P24928	1970 aa	Known RBP	7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	OR14I1	A6ND48	311 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	ATP2A1	O14983	1001 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	ARHGAP6	O43182	974 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	NEMF	O60524	1076 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	FLOT1	O75955	427 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	AHSG	P02765	367 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	NCAM1	P13591	858 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	IDE	P14735	1019 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	COPB2	P35606	906 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	LONP1	P36776	959 aa	Known RBP	7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	ADCY8	P40145	1251 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	SPP2	Q13103	211 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	COG2	Q14746	738 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	TAF5	Q15542	800 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	FBXO47	Q5MNV8	452 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	RESP18	Q5W5W9	173 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	FASTKD5	Q7L8L6	764 aa	Known RBP	7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	ADGRG2	Q8IZP9	1017 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	MB21D1	Q8N884	522 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	FSIP1	Q8NA03	581 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	CCDC150	Q8NCX0	1101 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	PGBD1	Q96JS3	809 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	MAGEB5	Q9BZ81	275 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	SLC6A17	Q9H1V8	727 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	RPAP3	Q9H6T3	665 aa	Predicted RBP	7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	HOXC10	Q9NYD6	342 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	MOCS1	Q9NZB8	636 aa		7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	7.72	□□□□□ -1.17
CNOT1-222	ENST00000570139		A0A0G2JLL6	359 aa	Predicted RBP	7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	DYTN	A2CJ06	578 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	MBD3L4	A6NDZ8	208 aa	Predicted RBP	7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	MBD3L3	A6NE82	208 aa	Predicted RBP	7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	GCOM1	H8Y6P7	765 aa	Predicted RBP	7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	TRIM38	O00635	465 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	CYP7B1	O75881	506 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	ABHD16A	O95870	558 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	C8B	P07358	591 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	POLR2M	P0CAP2	368 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	GYPE	P15421	78 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	KRT9	P35527	623 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	CARS	P49589	748 aa	Known RBP	7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	MPP1	Q00013	466 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	CREM	Q03060	361 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	TMEM266	Q2M3C6	531 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	LMBRD2	Q68DH5	695 aa	Predicted RBP	7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	TANGO2	Q6ICL3	276 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	JMJD6	Q6NYC1	403 aa	Predicted RBP	7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	C1orf122	Q6ZSJ8	110 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	PRRT2	Q7Z6L0	340 aa	Predicted RBP	7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	BCL6B	Q8N143	479 aa	Predicted RBP	7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	TBCK	Q8TEA7	893 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	MAML1	Q92585	1016 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	GLIS2	Q9BZE0	524 aa	Predicted RBP	7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	FTO	Q9C0B1	505 aa	Known RBP eCLIP	7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	TNMD	Q9H2S6	317 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	CLSTN2	Q9H4D0	955 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	LDAH	Q9H6V9	325 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	SMURF2	Q9HAU4	748 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	MAGEF1	Q9HAY2	307 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	TMEM8A	Q9HCN3	771 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	WASH6P	Q9NQA3	447 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	ZNF212	Q9UDV6	495 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	CCPG1	Q9ULG6	757 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	ADAMTS5	Q9UNA0	930 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	SCAF8	Q9UPN6	1271 aa	Known RBP	7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	HPSE	Q9Y251	543 aa		7.71	□□□□□ -1.18
CNOT1-222	ENST00000570139	TRPM7	Q96QT4	1865 aa		7.7	□□□□□ -1.18
CNOT1-222	ENST00000570139	RLF	Q13129	1914 aa		7.7	□□□□□ -1.18
CNOT1-222	ENST00000570139	CYP3A7-CYP3A51P	A0A087WV96	503 aa		7.7	□□□□□ -1.18
CNOT1-222	ENST00000570139	FAM234B	A2RU67	622 aa		7.7	□□□□□ -1.18
CNOT1-222	ENST00000570139	VWA5A	O00534	786 aa		7.7	□□□□□ -1.18
CNOT1-222	ENST00000570139	MEIS2	O14770	477 aa		7.7	□□□□□ -1.18
CNOT1-222	ENST00000570139	ZNF500	O60304	480 aa	Predicted RBP	7.7	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms