RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 GFRA2O00451 464 aa13.59□□□□□ -0.23
CNOT1-220ENST00000569916 KLF8O95600 359 aaPredicted RBP13.59□□□□□ -0.23
CNOT1-220ENST00000569916 APBB3O95704 486 aa13.59□□□□□ -0.23
CNOT1-220ENST00000569916 LATS1O95835 1130 aa13.59□□□□□ -0.23
CNOT1-220ENST00000569916 TPM2P07951 284 aa13.59□□□□□ -0.23
CNOT1-220ENST00000569916 CISD3P0C7P0 127 aa13.59□□□□□ -0.23
CNOT1-220ENST00000569916 CNR2P34972 360 aa13.59□□□□□ -0.23
CNOT1-220ENST00000569916 HARS2P49590 506 aaKnown RBP13.59□□□□□ -0.23
CNOT1-220ENST00000569916 DGKGP49619 791 aa13.59□□□□□ -0.23
CNOT1-220ENST00000569916 HSF5Q4G112 596 aaPredicted RBP13.59□□□□□ -0.23
CNOT1-220ENST00000569916 ANO6Q4KMQ2 910 aa13.59□□□□□ -0.23
CNOT1-220ENST00000569916 TOGARAM2Q6ZUX3 1019 aa13.59□□□□□ -0.23
CNOT1-220ENST00000569916 AOPEPQ8N6M6 819 aa13.59□□□□□ -0.23
CNOT1-220ENST00000569916 TXNDC5Q8NBS9 432 aaKnown RBP13.59□□□□□ -0.23
CNOT1-220ENST00000569916 ZDHHC4Q9NPG8 344 aa13.59□□□□□ -0.23
CNOT1-220ENST00000569916 STOML2Q9UJZ1 356 aa13.59□□□□□ -0.23
CNOT1-220ENST00000569916 NAALADL1Q9UQQ1 740 aa13.59□□□□□ -0.23
CNOT1-220ENST00000569916 OTOGLQ3ZCN5 2332 aa13.59□□□□□ -0.23
CNOT1-220ENST00000569916 LGALS16A8MUM7 142 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 PRRT4C9JH25 899 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 EPHB6O15197 1021 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 ADAM23O75077 832 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 HNRNPLP14866 589 aaKnown RBP eCLIP13.58□□□□□ -0.249e-8■□□□□ 9.2
CNOT1-220ENST00000569916 CYP11B1P15538 503 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 KRT9P35527 623 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 TBX4P57082 545 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 BPIFB4P59827 614 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 RING1Q06587 406 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 NNTQ13423 1086 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 CRY1Q16526 586 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 PTPN20Q4JDL3 420 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 FKBP15Q5T1M5 1219 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 SYPL2Q5VXT5 272 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 TMEM92Q6UXU6 159 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 APTXQ7Z2E3 356 aaKnown RBP13.58□□□□□ -0.24
CNOT1-220ENST00000569916 TAC4Q86UU9 113 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 ZNF513Q8N8E2 541 aaPredicted RBP13.58□□□□□ -0.24
CNOT1-220ENST00000569916 TSTD1Q8NFU3 115 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 KCNV2Q8TDN2 545 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 RUBCNQ92622 972 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 PPP1R13BQ96KQ4 1090 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 SERPINB11Q96P15 392 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 TRIM62Q9BVG3 475 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 STK33Q9BYT3 514 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 POPDC2Q9HBU9 364 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 EBF1Q9UH73 591 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 SIK3Q9Y2K2 1263 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 SLC27A6Q9Y2P4 619 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 STARD13Q9Y3M8 1113 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 FAM186AA6NE01 2351 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 SPAG17Q6Q759 2223 aa13.58□□□□□ -0.24
CNOT1-220ENST00000569916 LRRC10BA6NIK2 292 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 AXIN1O15169 862 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 IGLV3-25P01717 112 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 ERBB2P04626 1255 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 CYBBP04839 570 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 CDH5P33151 784 aaPredicted RBP13.57□□□□□ -0.24
CNOT1-220ENST00000569916 YWHAZP63104 245 aaKnown RBP13.57□□□□□ -0.24
CNOT1-220ENST00000569916 SIM2Q14190 667 aaPredicted RBP13.57□□□□□ -0.24
CNOT1-220ENST00000569916 TAF5Q15542 800 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 LPAL2Q16609 132 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 ADGRF1Q5T601 910 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 EGFLAMQ63HQ2 1017 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 NUGGCQ68CJ6 796 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 PRR23BQ6ZRT6 265 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 NUDT18Q6ZVK8 323 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 FAM183BPQ6ZVS7 135 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 NOP9Q86U38 636 aaKnown RBP13.57□□□□□ -0.24
CNOT1-220ENST00000569916 RASSF3Q86WH2 238 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 UNC45BQ8IWX7 931 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 DCLK2Q8N568 766 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 ANKRD20A12PQ8NF67 263 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 ADAM32Q8TC27 787 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 EPS8L1Q8TE68 723 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 GAB3Q8WWW8 586 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 DDX1Q92499 740 aaKnown RBP13.57□□□□□ -0.24
CNOT1-220ENST00000569916 SLC39A13Q96H72 371 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 FCRL2Q96LA5 508 aaPredicted RBP13.57□□□□□ -0.24
CNOT1-220ENST00000569916 NOX5Q96PH1 765 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 BPIFA3Q9BQP9 254 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 FUCA2Q9BTY2 467 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 FAM207AQ9NSI2 230 aaPredicted RBP13.57□□□□□ -0.24
CNOT1-220ENST00000569916 ASNSD1Q9NWL6 643 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 NCDNQ9UBB6 729 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 CLEC4EQ9ULY5 219 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 TLR6Q9Y2C9 796 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 ZNF292O60281 2723 aa13.57□□□□□ -0.24
CNOT1-220ENST00000569916 CAPN9O14815 690 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 IRAK2O43187 625 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 ACSL4O60488 711 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 TSPAN3O60637 253 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 RPP40O75818 363 aaKnown RBP13.56□□□□□ -0.24
CNOT1-220ENST00000569916 ATP1A3P13637 1013 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 HOXD9P28356 352 aaPredicted RBP13.56□□□□□ -0.24
CNOT1-220ENST00000569916 SGSHP51688 502 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 DGKEP52429 567 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 JAM2P57087 298 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 ZNF445P59923 1031 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 POLR2FP61218 127 aaKnown RBP13.56□□□□□ -0.24
CNOT1-220ENST00000569916 PITX1P78337 314 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms