RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 TDP1Q9NUW8 608 aa13.44□□□□□ -0.26
CNEP1R1-211ENST00000569647 OBP2AQ9NY56 170 aa13.44□□□□□ -0.26
CNEP1R1-211ENST00000569647 TMEM59LQ9UK28 342 aa13.44□□□□□ -0.26
CNEP1R1-211ENST00000569647 NDRG2Q9UN36 371 aaKnown RBP13.44□□□□□ -0.26
CNEP1R1-211ENST00000569647 ARHGAP26Q9UNA1 814 aa13.44□□□□□ -0.26
CNEP1R1-211ENST00000569647 NAALADL1Q9UQQ1 740 aa13.44□□□□□ -0.26
CNEP1R1-211ENST00000569647 GVINP1Q7Z2Y8 2422 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 SPTBN4Q9H254 2564 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 SOWAHDA6NJG2 315 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 MAN2B1O00754 1011 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 MDM4O15151 490 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 NCAM2O15394 837 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 GRAP2O75791 330 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 LCA5LO95447 670 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 NCAM1P13591 858 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 USP4Q13107 963 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 FZD5Q13467 585 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 ARHGAP29Q52LW3 1261 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 SYPL2Q5VXT5 272 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 PLEKHA7Q6IQ23 1121 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 TRNP1Q6NT89 227 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 RSRC2Q7L4I2 434 aaKnown RBP13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 ASCL5Q7RTU5 278 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 PHLDB2Q86SQ0 1253 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 TADA2BQ86TJ2 420 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 MAML2Q8IZL2 1156 aaPredicted RBP13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 DEFB106AQ8N104 65 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 RIN3Q8TB24 985 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 BPIFB1Q8TDL5 484 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 CSGALNACT1Q8TDX6 532 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 DQX1Q8TE96 717 aaKnown RBP13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 BAG1Q99933 345 aaPredicted RBP13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 KLF16Q9BXK1 252 aaPredicted RBP13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 KIF9Q9HAQ2 790 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 METTL5Q9NRN9 209 aaKnown RBP13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 SPATA6Q9NWH7 488 aaPredicted RBP13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 DNMT3LQ9UJW3 386 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 CCL26Q9Y258 94 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 CPQQ9Y646 472 aa13.43□□□□□ -0.26
CNEP1R1-211ENST00000569647 LAMA1P25391 3075 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 ANKRD62A6NC57 917 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 PRR23AA6NEV1 266 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 ATMINO43313 823 aaPredicted RBP13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 GJB6O95452 261 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 IGLV3-25P01717 112 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 SP9P0CG40 484 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 MYBL1P10243 752 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 MBL2P11226 248 aaPredicted RBP13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 FLT3P36888 993 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 MATKP42679 507 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 RPS9P46781 194 aaKnown RBP13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 GALCP54803 685 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 MLLT6P55198 1093 aaPredicted RBP13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 PITX1P78337 314 aaPredicted RBP13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 EFEMP1Q12805 493 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 MTF1Q14872 753 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 ZNF77Q15935 545 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 OTUD1Q5VV17 481 aaPredicted RBP13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 DNAJC24Q6P3W2 148 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 RAD9BQ6WBX8 426 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 TAC4Q86UU9 113 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 CELF5Q8N6W0 485 aaKnown RBP13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 JOSD2Q8TAC2 188 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 RNF139Q8WU17 664 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 FAM3CQ92520 227 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 ANP32BQ92688 251 aaKnown RBP13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 NKD2Q969F2 451 aaPredicted RBP13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 ZNF653Q96CK0 615 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 ADAM33Q9BZ11 813 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 THAP2Q9H0W7 228 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 GTSE1Q9NYZ3 720 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 MARCH2Q9P0N8 246 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 RASAL2Q9UJF2 1139 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 MYOFQ9NZM1 2061 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 OTOGLQ3ZCN5 2332 aa13.42□□□□□ -0.26
CNEP1R1-211ENST00000569647 C2CD4BA6NLJ0 364 aa13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 SIGLEC16A6NMB1 481 aa13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 EIF3CLB5ME19 914 aaKnown RBP13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 LEFTY2O00292 366 aa13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 CAPN9O14815 690 aa13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 LAMTOR5O43504 91 aa13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 NDUFA10O95299 355 aa13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 KRT3P12035 628 aa13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 ABCB4P21439 1286 aa13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 NOS2P35228 1153 aa13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 CYLC1P35663 651 aaPredicted RBP13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 SOX9P48436 509 aa13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 KPNA1P52294 538 aaPredicted RBP13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 RNASE9P60153 205 aaKnown RBP13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 TNK2Q07912 1038 aa13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 MAMLD1Q13495 774 aa13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 EIF4EBP2Q13542 120 aaPredicted RBP13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 DCAF6Q58WW2 860 aa13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 DDX42Q86XP3 938 aaKnown RBP eCLIP13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 MIB1Q86YT6 1006 aa13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 EMC1Q8N766 993 aa13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 SH3RF2Q8TEC5 729 aa13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 NT5C3BQ969T7 300 aa13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 WBP2Q969T9 261 aa13.41□□□□□ -0.26
CNEP1R1-211ENST00000569647 ARHGEF26Q96DR7 871 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms