RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 CPQQ9Y646 472 aa24.41■■□□□ 1.5
RAB40C-212ENST00000569575 FAM170AA1A519 330 aa24.4■■□□□ 1.5
RAB40C-212ENST00000569575 ECI2O75521 394 aa24.4■■□□□ 1.5
RAB40C-212ENST00000569575 APOEP02649 317 aa24.4■■□□□ 1.5
RAB40C-212ENST00000569575 NAP1L1P55209 391 aaKnown RBP24.4■■□□□ 1.5
RAB40C-212ENST00000569575 FAM172AQ8WUF8 416 aa24.4■■□□□ 1.5
RAB40C-212ENST00000569575 NTAN1Q96AB6 310 aa24.4■■□□□ 1.5
RAB40C-212ENST00000569575 ZFRQ96KR1 1074 aaKnown RBP24.4■■□□□ 1.5
RAB40C-212ENST00000569575 ZSWIM3Q96MP5 696 aa24.4■■□□□ 1.5
RAB40C-212ENST00000569575 DDX50Q9BQ39 737 aaKnown RBP24.4■■□□□ 1.5
RAB40C-212ENST00000569575 THG1LQ9NWX6 298 aaKnown RBP24.4■■□□□ 1.5
RAB40C-212ENST00000569575 IGSF9Q9P2J2 1179 aa24.4■■□□□ 1.5
RAB40C-212ENST00000569575 NUDT5Q9UKK9 219 aa24.4■■□□□ 1.5
RAB40C-212ENST00000569575 HELZP42694 1942 aaKnown RBP24.39■■□□□ 1.5
RAB40C-212ENST00000569575 GJB6O95452 261 aa24.39■■□□□ 1.49
RAB40C-212ENST00000569575 ATP11AP98196 1134 aa24.39■■□□□ 1.49
RAB40C-212ENST00000569575 OGDHQ02218 1023 aa24.39■■□□□ 1.49
RAB40C-212ENST00000569575 HADHQ16836 314 aaKnown RBP24.39■■□□□ 1.49
RAB40C-212ENST00000569575 BOLA3Q53S33 107 aa24.39■■□□□ 1.49
RAB40C-212ENST00000569575 ATP6V0D2Q8N8Y2 350 aa24.39■■□□□ 1.49
RAB40C-212ENST00000569575 TPCN2Q8NHX9 752 aa24.39■■□□□ 1.49
RAB40C-212ENST00000569575 DEPDC1BQ8WUY9 529 aa24.39■■□□□ 1.49
RAB40C-212ENST00000569575 BTN2A3PQ96KV6 586 aa24.39■■□□□ 1.49
RAB40C-212ENST00000569575 CDH22Q9UJ99 828 aa24.39■■□□□ 1.49
RAB40C-212ENST00000569575 SH3BP1Q9Y3L3 701 aa24.39■■□□□ 1.49
RAB40C-212ENST00000569575 SZT2Q5T011 3432 aa24.39■■□□□ 1.49
RAB40C-212ENST00000569575 ANHXE9PGG2 379 aa24.38■■□□□ 1.49
RAB40C-212ENST00000569575 LEFTY2O00292 366 aa24.38■■□□□ 1.49
RAB40C-212ENST00000569575 NRG2O14511 850 aaPredicted RBP24.38■■□□□ 1.49
RAB40C-212ENST00000569575 STC2O76061 302 aa24.38■■□□□ 1.49
RAB40C-212ENST00000569575 MSNP26038 577 aaKnown RBP24.38■■□□□ 1.49
RAB40C-212ENST00000569575 SLC11A2P49281 568 aa24.38■■□□□ 1.49
RAB40C-212ENST00000569575 ZNF135P52742 658 aaPredicted RBP24.38■■□□□ 1.49
RAB40C-212ENST00000569575 HDAC4P56524 1084 aa24.38■■□□□ 1.49
RAB40C-212ENST00000569575 NME3Q13232 169 aa24.38■■□□□ 1.49
RAB40C-212ENST00000569575 KIAA1524Q8TCG1 905 aa24.38■■□□□ 1.49
RAB40C-212ENST00000569575 RNF34Q969K3 372 aa24.38■■□□□ 1.49
RAB40C-212ENST00000569575 C1orf74Q96LT6 269 aa24.38■■□□□ 1.49
RAB40C-212ENST00000569575 HAPLN3Q96S86 360 aa24.38■■□□□ 1.49
RAB40C-212ENST00000569575 ARHGEF38Q9NXL2 777 aa24.38■■□□□ 1.49
RAB40C-212ENST00000569575 STOML2Q9UJZ1 356 aa24.38■■□□□ 1.49
RAB40C-212ENST00000569575 KCNU1A8MYU2 1149 aa24.37■■□□□ 1.49
RAB40C-212ENST00000569575 ZNF252P-AS1Q0IIN9 211 aa24.37■■□□□ 1.49
RAB40C-212ENST00000569575 SCAPQ12770 1279 aa24.37■■□□□ 1.49
RAB40C-212ENST00000569575 USP4Q13107 963 aa24.37■■□□□ 1.49
RAB40C-212ENST00000569575 ZNF77Q15935 545 aa24.37■■□□□ 1.49
RAB40C-212ENST00000569575 C15orf59Q2T9L4 293 aaPredicted RBP24.37■■□□□ 1.49
RAB40C-212ENST00000569575 LRRC38Q5VT99 294 aa24.37■■□□□ 1.49
RAB40C-212ENST00000569575 OTUD1Q5VV17 481 aaPredicted RBP24.37■■□□□ 1.49
RAB40C-212ENST00000569575 MFSD6LQ8IWD5 586 aa24.37■■□□□ 1.49
RAB40C-212ENST00000569575 TRIM58Q8NG06 486 aa24.37■■□□□ 1.49
RAB40C-212ENST00000569575 BPIFB1Q8TDL5 484 aa24.37■■□□□ 1.49
RAB40C-212ENST00000569575 SH3RF2Q8TEC5 729 aa24.37■■□□□ 1.49
RAB40C-212ENST00000569575 FCRL2Q96LA5 508 aaPredicted RBP24.37■■□□□ 1.49
RAB40C-212ENST00000569575 ALS2CR12Q96Q35 445 aa24.37■■□□□ 1.49
RAB40C-212ENST00000569575 PIGVQ9NUD9 493 aa24.37■■□□□ 1.49
RAB40C-212ENST00000569575 GUCA1BQ9UMX6 200 aa24.37■■□□□ 1.49
RAB40C-212ENST00000569575 DUSP10Q9Y6W6 482 aa24.37■■□□□ 1.49
RAB40C-212ENST00000569575 MDM4O15151 490 aa24.36■■□□□ 1.49
RAB40C-212ENST00000569575 PRPSAP2O60256 369 aa24.36■■□□□ 1.49
RAB40C-212ENST00000569575 LRCH4O75427 683 aa24.36■■□□□ 1.49
RAB40C-212ENST00000569575 KRT7P08729 469 aa24.36■■□□□ 1.49
RAB40C-212ENST00000569575 CHKAP35790 457 aa24.36■■□□□ 1.49
RAB40C-212ENST00000569575 MESDQ14696 234 aa24.36■■□□□ 1.49
RAB40C-212ENST00000569575 CDO1Q16878 200 aa24.36■■□□□ 1.49
RAB40C-212ENST00000569575 CC2D1AQ6P1N0 951 aaPredicted RBP24.36■■□□□ 1.49
RAB40C-212ENST00000569575 POLNQ7Z5Q5 900 aa24.36■■□□□ 1.49
RAB40C-212ENST00000569575 SLFN11Q7Z7L1 901 aa24.36■■□□□ 1.49
RAB40C-212ENST00000569575 ADHFE1Q8IWW8 467 aa24.36■■□□□ 1.49
RAB40C-212ENST00000569575 CCAR2Q8N163 923 aaKnown RBP24.36■■□□□ 1.49
RAB40C-212ENST00000569575 ADAM32Q8TC27 787 aa24.36■■□□□ 1.49
RAB40C-212ENST00000569575 TRIM7Q9C029 511 aa24.36■■□□□ 1.49
RAB40C-212ENST00000569575 RETREG1Q9H6L5 497 aa24.36■■□□□ 1.49
RAB40C-212ENST00000569575 MACROD2A1Z1Q3 448 aa24.35■■□□□ 1.49
RAB40C-212ENST00000569575 MSI1O43347 362 aaKnown RBP24.35■■□□□ 1.49
RAB40C-212ENST00000569575 BUB1BO60566 1050 aaPredicted RBP24.35■■□□□ 1.49
RAB40C-212ENST00000569575 ADRA1BP35368 520 aa24.35■■□□□ 1.49
RAB40C-212ENST00000569575 PITX1P78337 314 aaPredicted RBP24.35■■□□□ 1.49
RAB40C-212ENST00000569575 FCHO2Q0JRZ9 810 aa24.35■■□□□ 1.49
RAB40C-212ENST00000569575 Q6ZNB5 142 aa24.35■■□□□ 1.49
RAB40C-212ENST00000569575 DAAM2Q86T65 1068 aa24.35■■□□□ 1.49
RAB40C-212ENST00000569575 REXO1L1PQ8IX06 675 aa24.35■■□□□ 1.49
RAB40C-212ENST00000569575 ADAMTS19Q8TE59 1207 aa24.35■■□□□ 1.49
RAB40C-212ENST00000569575 TEKT4Q8WW24 435 aa24.35■■□□□ 1.49
RAB40C-212ENST00000569575 LZTFL1Q9NQ48 299 aa24.35■■□□□ 1.49
RAB40C-212ENST00000569575 GKN1Q9NS71 199 aa24.35■■□□□ 1.49
RAB40C-212ENST00000569575 SMPD4Q9NXE4 827 aa24.35■■□□□ 1.49
RAB40C-212ENST00000569575 CFAP97Q9P2B7 532 aa24.35■■□□□ 1.49
RAB40C-212ENST00000569575 SALL4Q9UJQ4 1053 aa24.35■■□□□ 1.49
RAB40C-212ENST00000569575 USP18Q9UMW8 372 aa24.35■■□□□ 1.49
RAB40C-212ENST00000569575 ALG6Q9Y672 507 aa24.35■■□□□ 1.49
RAB40C-212ENST00000569575 HEPACAM2A8MVW5 462 aa24.34■■□□□ 1.49
RAB40C-212ENST00000569575 LOC730098B7Z3J9 87 aa24.34■■□□□ 1.49
RAB40C-212ENST00000569575 PRAMEF12O95522 483 aa24.34■■□□□ 1.49
RAB40C-212ENST00000569575 PSMC3P17980 439 aa24.34■■□□□ 1.49
RAB40C-212ENST00000569575 FCARP24071 287 aa24.34■■□□□ 1.49
RAB40C-212ENST00000569575 MIPP30301 263 aa24.34■■□□□ 1.49
RAB40C-212ENST00000569575 HTR7P34969 479 aa24.34■■□□□ 1.49
RAB40C-212ENST00000569575 NRG1Q02297 640 aaPredicted RBP24.34■■□□□ 1.49
RAB40C-212ENST00000569575 TFF2Q03403 129 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms