RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 GREM1O60565 184 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 TULP3O75386 442 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 FBXO21O94952 628 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 GJB6O95452 261 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 APODP05090 189 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 FYNP06241 537 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 SOX5P35711 763 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 STAT1P42224 750 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 ACADSBP45954 432 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 RPS9P46781 194 aaKnown RBP9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 CXCL12P48061 93 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 FNTBP49356 437 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 HARS2P49590 506 aaKnown RBP9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 TBX4P57082 545 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 BPIFB4P59827 614 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 TPM4P67936 248 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 NME3Q13232 169 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 SKOR2Q2VWA4 1001 aaPredicted RBP9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 PTPN20Q4JDL3 420 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 ZC3H12AQ5D1E8 599 aaKnown RBP9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 DGKKQ5KSL6 1271 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 C10orf76Q5T2E6 689 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 TAC4Q86UU9 113 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 ERICH1Q86X53 443 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 DNAAF5Q86Y56 855 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 ALLCQ8N6M5 410 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 DQX1Q8TE96 717 aaKnown RBP9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 IPO4Q8TEX9 1081 aaKnown RBP9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 PTCD2Q8WV60 388 aaKnown RBP9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 MSANTD3Q96H12 275 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 NOX5Q96PH1 765 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 PRRX2Q99811 253 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 BPIFA3Q9BQP9 254 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 OSBPL6Q9BZF3 934 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 FAM204AQ9H8W3 233 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 OLA1Q9NTK5 396 aaKnown RBP9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 DEC1Q9P2X7 70 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 XPO7Q9UIA9 1087 aaKnown RBP9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 CLEC4EQ9ULY5 219 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 SLC8A2Q9UPR5 921 aa9.41□□□□□ -0.9
GTF3C1-210ENST00000569394 TMCO5BA8MYB1 307 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 K7EQS6 105 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 KAT7O95251 611 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 KLF8O95600 359 aaPredicted RBP9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 CHRNB2P17787 502 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 DRD1P21728 446 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 GGCXP38435 758 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 SGSHP51688 502 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 YWHAZP63104 245 aaKnown RBP9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 FANCCQ00597 558 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 FAM102AQ5T9C2 384 aaPredicted RBP9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 GRAMD4Q6IC98 578 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 KLHDC10Q6PID8 442 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 Q6ZNB5 142 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 MMS22LQ6ZRQ5 1243 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 PRR23BQ6ZRT6 265 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 TMEM110Q86TL2 294 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 CFAP52Q8N1V2 620 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 TMEM35BQ8NCS4 154 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 IRGQQ8WZA9 623 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 DDX1Q92499 740 aaKnown RBP9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 PLD4Q96BZ4 506 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 XPO6Q96QU8 1125 aaKnown RBP9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 PCDHB18PQ96TA0 734 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 HINFPQ9BQA5 517 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 C11orf70Q9BRQ4 267 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 DCLK3Q9C098 648 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 PCDHGC3Q9UN70 934 aa9.4□□□□□ -0.9
GTF3C1-210ENST00000569394 TBL1XO60907 577 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 TRUB2O95900 331 aaKnown RBP9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 CYBBP04839 570 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 SKILP12757 684 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 TFE3P19532 575 aaPredicted RBP9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 SLC6A4P31645 630 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 DGKGP49619 791 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 SULT1E1P49888 294 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 CCR3P51677 355 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 ATXN1P54253 815 aaKnown RBP9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 MLLT6P55198 1093 aaPredicted RBP9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 UBASH3AP57075 661 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 JAM2P57087 298 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 FMO1Q01740 532 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 SLC6A3Q01959 620 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 TRIP4Q15650 581 aaPredicted RBP9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 RAP1GAP2Q684P5 730 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 C1orf228Q6PIY5 440 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 PGBD3Q8N328 593 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 SPEM1Q8N4L4 309 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 EMC1Q8N766 993 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 TXNDC5Q8NBS9 432 aaKnown RBP9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 EPS8L1Q8TE68 723 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 ATRIPQ8WXE1 791 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 EXOC4Q96A65 974 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 OTUB2Q96DC9 234 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 C18orf8Q96DM3 657 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 MYEOVQ96EZ4 313 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 ERGIC2Q96RQ1 377 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 ACOX2Q99424 681 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 TPSD1Q9BZJ3 242 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 LHX5Q9H2C1 402 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms