RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 SLC25A52Q3SY17 297 aa13.59□□□□□ -0.23
CNOT1-217ENST00000569263 PLEKHA7Q6IQ23 1121 aa13.59□□□□□ -0.23
CNOT1-217ENST00000569263 CCDC170Q8IYT3 715 aa13.59□□□□□ -0.23
CNOT1-217ENST00000569263 RXFP2Q8WXD0 754 aa13.59□□□□□ -0.23
CNOT1-217ENST00000569263 CTNNBL1Q8WYA6 563 aaPredicted RBP13.59□□□□□ -0.23
CNOT1-217ENST00000569263 CFAP57Q96MR6 1250 aa13.59□□□□□ -0.23
CNOT1-217ENST00000569263 TBCBQ99426 244 aa13.59□□□□□ -0.23
CNOT1-217ENST00000569263 NPY6RQ99463 290 aa13.59□□□□□ -0.23
CNOT1-217ENST00000569263 BAG1Q99933 345 aaPredicted RBP13.59□□□□□ -0.23
CNOT1-217ENST00000569263 FAM83CQ9BQN1 747 aa13.59□□□□□ -0.23
CNOT1-217ENST00000569263 THAP2Q9H0W7 228 aa13.59□□□□□ -0.23
CNOT1-217ENST00000569263 LUC7LQ9NQ29 371 aaKnown RBP13.59□□□□□ -0.23
CNOT1-217ENST00000569263 CA14Q9ULX7 337 aa13.59□□□□□ -0.23
CNOT1-217ENST00000569263 NENFQ9UMX5 172 aa13.59□□□□□ -0.23
CNOT1-217ENST00000569263 PAXBP1Q9Y5B6 917 aa13.59□□□□□ -0.23
CNOT1-217ENST00000569263 COL4A3Q01955 1670 aa13.59□□□□□ -0.23
CNOT1-217ENST00000569263 TCRBV5S1A1TA0A578 114 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 SOWAHDA6NJG2 315 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 C2CD4BA6NLJ0 364 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 MOCS2O96007 188 aaPredicted RBP13.58□□□□□ -0.24
CNOT1-217ENST00000569263 F9P00740 461 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 IGLV3-27P01718 113 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 H2AFZP0C0S5 128 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 SLC2A3P11169 496 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 FECHP22830 423 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 CCR1P32246 355 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 RFC1P35251 1148 aaPredicted RBP13.58□□□□□ -0.24
CNOT1-217ENST00000569263 PTPN9P43378 593 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 SLC11A2P49281 568 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 GALCP54803 685 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 ATP11AP98196 1134 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 DEUP1Q05D60 604 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 TNK2Q07912 1038 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 NR1H3Q13133 447 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 MAMLD1Q13495 774 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 RUNX3Q13761 415 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 SPA17Q15506 151 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 ZC3H12AQ5D1E8 599 aaKnown RBP13.58□□□□□ -0.24
CNOT1-217ENST00000569263 TRNP1Q6NT89 227 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 Q6ZNB5 142 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 H2AFVQ71UI9 128 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 TTC8Q8TAM2 541 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 FCRL2Q96LA5 508 aaPredicted RBP13.58□□□□□ -0.24
CNOT1-217ENST00000569263 LINC00597Q9H2U6 94 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 TRPV5Q9NQA5 729 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 HPS4Q9NQG7 708 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 ARHGEF3Q9NR81 526 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.58□□□□□ -0.24
CNOT1-217ENST00000569263 GTSE1Q9NYZ3 720 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 SLC12A6Q9UHW9 1150 aa13.58□□□□□ -0.24
CNOT1-217ENST00000569263 AGO1Q9UL18 857 aaKnown RBP13.58□□□□□ -0.24
CNOT1-217ENST00000569263 MIA3Q5JRA6 1907 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 ARNTLO00327 626 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 GREM1O60565 184 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 LATS1O95835 1130 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 ADH1CP00326 375 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 KLKB1P03952 638 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 CYP17A1P05093 508 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 TFE3P19532 575 aaPredicted RBP13.57□□□□□ -0.24
CNOT1-217ENST00000569263 RDXP35241 583 aaKnown RBP13.57□□□□□ -0.24
CNOT1-217ENST00000569263 RPL7AP62424 266 aaKnown RBP13.57□□□□□ -0.24
CNOT1-217ENST00000569263 SIGLEC14Q08ET2 396 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 PPP2R5DQ14738 602 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 C15orf59Q2T9L4 293 aaPredicted RBP13.57□□□□□ -0.24
CNOT1-217ENST00000569263 PPP1R15BQ5SWA1 713 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 C10orf76Q5T2E6 689 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 OTUD1Q5VV17 481 aaPredicted RBP13.57□□□□□ -0.24
CNOT1-217ENST00000569263 ATP6V0D2Q8N8Y2 350 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 EDAQ92838 391 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 NT5C3BQ969T7 300 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 PGAP3Q96FM1 320 aaPredicted RBP13.57□□□□□ -0.24
CNOT1-217ENST00000569263 SLC39A13Q96H72 371 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 DDX50Q9BQ39 737 aaKnown RBP13.57□□□□□ -0.24
CNOT1-217ENST00000569263 NUP85Q9BW27 656 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 PACSIN1Q9BY11 444 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 ECT2Q9H8V3 914 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 HEBP1Q9NRV9 189 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 PIGVQ9NUD9 493 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 TMEM51Q9NW97 253 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 WNT16Q9UBV4 365 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 PIAS3Q9Y6X2 628 aa13.57□□□□□ -0.24
CNOT1-217ENST00000569263 CCP110O43303 1012 aa13.56□□□□□ -0.24
CNOT1-217ENST00000569263 NRDCO43847 1150 aa13.56□□□□□ -0.24
CNOT1-217ENST00000569263 ACSL4O60488 711 aa13.56□□□□□ -0.24
CNOT1-217ENST00000569263 NDUFA10O95299 355 aa13.56□□□□□ -0.24
CNOT1-217ENST00000569263 CYBBP04839 570 aa13.56□□□□□ -0.24
CNOT1-217ENST00000569263 CYP1A2P05177 515 aa13.56□□□□□ -0.24
CNOT1-217ENST00000569263 TMEM253P0C7T8 217 aa13.56□□□□□ -0.24
CNOT1-217ENST00000569263 ADH5P11766 374 aa13.56□□□□□ -0.24
CNOT1-217ENST00000569263 PSMA2P25787 234 aa13.56□□□□□ -0.24
CNOT1-217ENST00000569263 CHKAP35790 457 aa13.56□□□□□ -0.24
CNOT1-217ENST00000569263 ZNF143P52747 638 aaPredicted RBP13.56□□□□□ -0.24
CNOT1-217ENST00000569263 VCPP55072 806 aaKnown RBP13.56□□□□□ -0.24
CNOT1-217ENST00000569263 AMPD2Q01433 879 aa13.56□□□□□ -0.24
CNOT1-217ENST00000569263 MTA1Q13330 715 aa13.56□□□□□ -0.24
CNOT1-217ENST00000569263 DHCR24Q15392 516 aa13.56□□□□□ -0.24
CNOT1-217ENST00000569263 MLF2Q15773 248 aaPredicted RBP13.56□□□□□ -0.24
CNOT1-217ENST00000569263 ANO4Q32M45 955 aa13.56□□□□□ -0.24
CNOT1-217ENST00000569263 CCDC14Q49A88 953 aa13.56□□□□□ -0.24
CNOT1-217ENST00000569263 SLC44A4Q53GD3 710 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms