RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 PCDHGA12O60330 932 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 EXOC3O60645 756 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 EPHX1P07099 455 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 HLA-EP13747 358 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 PRKCHP24723 683 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 ADORA2BP29275 332 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 GRIA4P48058 902 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 PSEN1P49768 467 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 CCT8P50990 548 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 CCDC157Q569K6 752 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 FAM173BQ6P4H8 233 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 SERPINA13PQ6UXR4 307 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 CLEC20AQ6ZU45 233 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 FAM124AQ86V42 546 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 OR2T3Q8NH03 318 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 IGSF8Q969P0 613 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 JAKMIP2Q96AA8 810 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 PIWIL1Q96J94 861 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 CDK5RAP1Q96SZ6 601 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 DCLK3Q9C098 648 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 CIPCQ9C0C6 399 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 CUEDC2Q9H467 287 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 OSGEPQ9NPF4 335 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 HMGXB4Q9UGU5 601 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 NAGPAQ9UK23 515 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 ANKRD6Q9Y2G4 727 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 SLCO1B1Q9Y6L6 691 aa12.4□□□□□ -0.42
GTF3C1-209ENST00000568569 LRRIQ3A6PVS8 624 aaPredicted RBP12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 HHLA1C9JL84 531 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 TIMM44O43615 452 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 STX6O43752 255 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 KLKB1P03952 638 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 C4BPAP04003 597 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 CYBBP04839 570 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 RALAP11233 206 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 CLDN10P78369 228 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 COG7P83436 770 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 ARID5AQ03989 594 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 SLC39A14Q15043 492 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 E2F4Q16254 413 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 SGSM1Q2NKQ1 1148 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 CNNM4Q6P4Q7 775 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 DHRS13Q6UX07 377 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 TMPRSS12Q86WS5 348 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 ZNF276Q8N554 614 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 PIP4K2CQ8TBX8 421 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 PARD3BQ8TEW8 1205 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 SLC39A7Q92504 469 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 ELMO3Q96BJ8 720 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 NXPE2Q96DL1 559 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 USP28Q96RU2 1077 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 HNRNPABQ99729 332 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 LHX5Q9H2C1 402 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 C6orf106Q9H6K1 298 aaPredicted RBP12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 TM9SF3Q9HD45 589 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 CLIC5Q9NZA1 410 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 TFIP11Q9UBB9 837 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 FTSJ1Q9UET6 329 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 PTPRBP23467 1997 aa12.39□□□□□ -0.43
GTF3C1-209ENST00000568569 VNN1O95497 513 aa12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 PRB1P04280 392 aa12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 RPN1P04843 607 aaKnown RBP12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 CORO1AP31146 461 aaKnown RBP12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 ACSL1P33121 698 aa12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 KIF11P52732 1056 aa12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 EHHADHQ08426 723 aa12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 CAMK2GQ13555 558 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 KNOP1Q1ED39 458 aaKnown RBP12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 CCDC186Q7Z3E2 898 aa12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 ADAT2Q7Z6V5 191 aaKnown RBP12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 SCD5Q86SK9 330 aa12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 RBBP8NLQ8NC74 664 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 GOLGA5Q8TBA6 731 aa12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 PLEKHO2Q8TD55 490 aa12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 SORCS1Q8WY21 1168 aa12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 TAF4BQ92750 862 aa12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 DHX58Q96C10 678 aa12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 SLC2A11Q9BYW1 496 aa12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 BTBD1Q9H0C5 482 aa12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 RASAL2Q9UJF2 1139 aa12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 AGO1Q9UL18 857 aaKnown RBP12.38□□□□□ -0.43
GTF3C1-209ENST00000568569 H0Y8X5 98 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 PLK4O00444 970 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 ATXN7O15265 892 aaPredicted RBP12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 PAPSS1O43252 624 aaPredicted RBP12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 DFNA5O60443 496 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 C1QL1O75973 258 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 SEMA4FO95754 770 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 HMBSP08397 361 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 C7P10643 843 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 CD27P26842 260 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 HNF1BP35680 557 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 ASPAP45381 313 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 ZBTB16Q05516 673 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 INCA1Q0VD86 236 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 ZACNQ401N2 412 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 C6orf118Q5T5N4 469 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 ERICH6BQ5W0A0 696 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 TMEM215Q68D42 235 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms