RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 FAM204AQ9H8W3 233 aa18.74■□□□□ 0.59
COMMD4-222ENST00000568034 PIGVQ9NUD9 493 aa18.74■□□□□ 0.59
COMMD4-222ENST00000568034 DDIT4Q9NX09 232 aa18.74■□□□□ 0.59
COMMD4-222ENST00000568034 STAP1Q9ULZ2 295 aa18.74■□□□□ 0.59
COMMD4-222ENST00000568034 TLR6Q9Y2C9 796 aa18.74■□□□□ 0.59
COMMD4-222ENST00000568034 WNT6Q9Y6F9 365 aa18.74■□□□□ 0.59
COMMD4-222ENST00000568034 SCINQ9Y6U3 715 aa18.74■□□□□ 0.59
COMMD4-222ENST00000568034 M0QYT0 321 aa18.73■□□□□ 0.59
COMMD4-222ENST00000568034 CHADO15335 359 aa18.73■□□□□ 0.59
COMMD4-222ENST00000568034 ENDOD1O94919 500 aa18.73■□□□□ 0.59
COMMD4-222ENST00000568034 CORO1AP31146 461 aaKnown RBP18.73■□□□□ 0.59
COMMD4-222ENST00000568034 GDI1P31150 447 aa18.73■□□□□ 0.59
COMMD4-222ENST00000568034 KPNA1P52294 538 aaPredicted RBP18.73■□□□□ 0.59
COMMD4-222ENST00000568034 ZNF143P52747 638 aaPredicted RBP18.73■□□□□ 0.59
COMMD4-222ENST00000568034 SH3PXD2AQ5TCZ1 1133 aa18.73■□□□□ 0.59
COMMD4-222ENST00000568034 TRIM68Q6AZZ1 485 aa18.73■□□□□ 0.59
COMMD4-222ENST00000568034 BBS7Q8IWZ6 715 aa18.73■□□□□ 0.59
COMMD4-222ENST00000568034 ACRBPQ8NEB7 543 aa18.73■□□□□ 0.59
COMMD4-222ENST00000568034 FNIP1Q8TF40 1166 aa18.73■□□□□ 0.59
COMMD4-222ENST00000568034 OSCP1Q8WVF1 389 aa18.73■□□□□ 0.59
COMMD4-222ENST00000568034 TRMT61BQ9BVS5 477 aaKnown RBP18.73■□□□□ 0.59
COMMD4-222ENST00000568034 LINC00597Q9H2U6 94 aa18.73■□□□□ 0.59
COMMD4-222ENST00000568034 HPS4Q9NQG7 708 aa18.73■□□□□ 0.59
COMMD4-222ENST00000568034 INTUQ9ULD6 942 aa18.73■□□□□ 0.59
COMMD4-222ENST00000568034 DUSP12Q9UNI6 340 aa18.73■□□□□ 0.59
COMMD4-222ENST00000568034 SORCS3Q9UPU3 1222 aa18.73■□□□□ 0.59
COMMD4-222ENST00000568034 SH3BP1Q9Y3L3 701 aa18.73■□□□□ 0.59
COMMD4-222ENST00000568034 CCP110O43303 1012 aa18.72■□□□□ 0.59
COMMD4-222ENST00000568034 SDC4P31431 198 aa18.72■□□□□ 0.59
COMMD4-222ENST00000568034 MAGEA1P43355 309 aa18.72■□□□□ 0.59
COMMD4-222ENST00000568034 HDAC4P56524 1084 aa18.72■□□□□ 0.59
COMMD4-222ENST00000568034 ATP11AP98196 1134 aa18.72■□□□□ 0.59
COMMD4-222ENST00000568034 NME3Q13232 169 aa18.72■□□□□ 0.59
COMMD4-222ENST00000568034 EML3Q32P44 896 aa18.72■□□□□ 0.59
COMMD4-222ENST00000568034 ARHGAP29Q52LW3 1261 aa18.72■□□□□ 0.59
COMMD4-222ENST00000568034 ZC3H12AQ5D1E8 599 aaKnown RBP18.72■□□□□ 0.59
COMMD4-222ENST00000568034 C10orf76Q5T2E6 689 aa18.72■□□□□ 0.59
COMMD4-222ENST00000568034 DCUN1D2Q6PH85 259 aa18.72■□□□□ 0.59
COMMD4-222ENST00000568034 CCDC112Q8NEF3 446 aa18.72■□□□□ 0.59
COMMD4-222ENST00000568034 CTNNBL1Q8WYA6 563 aaPredicted RBP18.72■□□□□ 0.59
COMMD4-222ENST00000568034 NUP85Q9BW27 656 aa18.72■□□□□ 0.59
COMMD4-222ENST00000568034 MRPL47Q9HD33 250 aaKnown RBP18.72■□□□□ 0.59
COMMD4-222ENST00000568034 MUTYHQ9UIF7 546 aa18.72■□□□□ 0.59
COMMD4-222ENST00000568034 AGO1Q9UL18 857 aaKnown RBP18.72■□□□□ 0.59
COMMD4-222ENST00000568034 TFR2Q9UP52 801 aa18.72■□□□□ 0.59
COMMD4-222ENST00000568034 PCDHA13Q9Y5I0 950 aa18.72■□□□□ 0.59
COMMD4-222ENST00000568034 SYNJ2BP-COX16A0A087WUM0 186 aa18.71■□□□□ 0.59
COMMD4-222ENST00000568034 RCCD1A6NED2 376 aa18.71■□□□□ 0.59
COMMD4-222ENST00000568034 KCNU1A8MYU2 1149 aa18.71■□□□□ 0.59
COMMD4-222ENST00000568034 I6L893 689 aaPredicted RBP18.71■□□□□ 0.59
COMMD4-222ENST00000568034 SRFP11831 508 aa18.71■□□□□ 0.59
COMMD4-222ENST00000568034 ARSAP15289 507 aa18.71■□□□□ 0.59
COMMD4-222ENST00000568034 RDXP35241 583 aaKnown RBP18.71■□□□□ 0.59
COMMD4-222ENST00000568034 CXCR3P49682 368 aa18.71■□□□□ 0.59
COMMD4-222ENST00000568034 TNK2Q07912 1038 aa18.71■□□□□ 0.59
COMMD4-222ENST00000568034 IER5LQ5T953 404 aa18.71■□□□□ 0.59
COMMD4-222ENST00000568034 STRADAQ7RTN6 431 aa18.71■□□□□ 0.59
COMMD4-222ENST00000568034 FAM217AQ8IXS0 508 aa18.71■□□□□ 0.59
COMMD4-222ENST00000568034 YAF2Q8IY57 180 aa18.71■□□□□ 0.59
COMMD4-222ENST00000568034 ANP32BQ92688 251 aaKnown RBP18.71■□□□□ 0.59
COMMD4-222ENST00000568034 P2RY11Q96G91 374 aa18.71■□□□□ 0.59
COMMD4-222ENST00000568034 CNPY3Q9BT09 278 aa18.71■□□□□ 0.59
COMMD4-222ENST00000568034 ANLNQ9NQW6 1124 aa18.71■□□□□ 0.59
COMMD4-222ENST00000568034 SLC2A4RGQ9NR83 387 aa18.71■□□□□ 0.59
COMMD4-222ENST00000568034 DUS2Q9NX74 493 aaKnown RBP18.71■□□□□ 0.59
COMMD4-222ENST00000568034 COX16Q9P0S2 106 aa18.71■□□□□ 0.59
COMMD4-222ENST00000568034 XPO7Q9UIA9 1087 aaKnown RBP18.71■□□□□ 0.59
COMMD4-222ENST00000568034 STOML2Q9UJZ1 356 aa18.71■□□□□ 0.59
COMMD4-222ENST00000568034 LSM7Q9UK45 103 aaKnown RBP18.71■□□□□ 0.59
COMMD4-222ENST00000568034 OTOL1A6NHN0 477 aaPredicted RBP18.7■□□□□ 0.58
COMMD4-222ENST00000568034 GFRA2O00451 464 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 LATS1O95835 1130 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 GBP1P32455 592 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 DEUP1Q05D60 604 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 PPP2R5DQ14738 602 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 TCEAL1Q15170 157 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 PDGFRLQ15198 375 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 SPA17Q15506 151 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 CDO1Q16878 200 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 NUGGCQ68CJ6 796 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 NADSYN1Q6IA69 706 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 CC2D1AQ6P1N0 951 aaPredicted RBP18.7■□□□□ 0.58
COMMD4-222ENST00000568034 DENND1CQ8IV53 801 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 ARFGAP1Q8N6T3 406 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 ZNF564Q8TBZ8 553 aaPredicted RBP18.7■□□□□ 0.58
COMMD4-222ENST00000568034 FAM172AQ8WUF8 416 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 RFFLQ8WZ73 363 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 BTBD6Q96KE9 485 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 DESI2Q9BSY9 194 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 DCLK3Q9C098 648 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 EBF3Q9H4W6 596 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 BRD9Q9H8M2 597 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 OSGEPQ9NPF4 335 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 THG1LQ9NWX6 298 aaKnown RBP18.7■□□□□ 0.58
COMMD4-222ENST00000568034 ARHGEF38Q9NXL2 777 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 UVRAGQ9P2Y5 699 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 TICRRQ7Z2Z1 1910 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 MUC3AQ02505 3323 aa18.7■□□□□ 0.58
COMMD4-222ENST00000568034 ARHGAP6O43182 974 aa18.69■□□□□ 0.58
COMMD4-222ENST00000568034 MTA2O94776 668 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms