RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 DNAAF5Q86Y56 855 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 SUGP1Q8IWZ8 645 aaKnown RBP17.93■□□□□ 0.46
COMMD4-220ENST00000567720 FAM217AQ8IXS0 508 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 FAM3CQ92520 227 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 SLC39A13Q96H72 371 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 DNAJC7Q99615 494 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 DCLK3Q9C098 648 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 FAM204AQ9H8W3 233 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 SPHK2Q9NRA0 654 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 ADAM22Q9P0K1 906 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 CALCOCO1Q9P1Z2 691 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 TMEM59LQ9UK28 342 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 TLR6Q9Y2C9 796 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 MUC6Q6W4X9 2439 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 MUC22E2RYF6 1773 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-220ENST00000567720 DOCK4Q8N1I0 1966 aa17.92■□□□□ 0.46
COMMD4-220ENST00000567720 TCRBV5S1A1TA0A578 114 aa17.92■□□□□ 0.46
COMMD4-220ENST00000567720 TMCO5BA8MYB1 307 aa17.92■□□□□ 0.46
COMMD4-220ENST00000567720 HOXC11O43248 304 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-220ENST00000567720 SERPING1P05155 500 aa17.92■□□□□ 0.46
COMMD4-220ENST00000567720 CALB1P05937 261 aa17.92■□□□□ 0.46
COMMD4-220ENST00000567720 TFE3P19532 575 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-220ENST00000567720 HNRNPH3P31942 346 aaKnown RBP17.92■□□□□ 0.46
COMMD4-220ENST00000567720 OPRD1P41143 372 aa17.92■□□□□ 0.46
COMMD4-220ENST00000567720 MATKP42679 507 aa17.92■□□□□ 0.46
COMMD4-220ENST00000567720 RNASE9P60153 205 aaKnown RBP17.92■□□□□ 0.46
COMMD4-220ENST00000567720 TBX2Q13207 712 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-220ENST00000567720 NUGGCQ68CJ6 796 aa17.92■□□□□ 0.46
COMMD4-220ENST00000567720 ACAD10Q6JQN1 1059 aa17.92■□□□□ 0.46
COMMD4-220ENST00000567720 C1orf228Q6PIY5 440 aa17.92■□□□□ 0.46
COMMD4-220ENST00000567720 WDR59Q6PJI9 974 aa17.92■□□□□ 0.46
COMMD4-220ENST00000567720 TMEM25Q86YD3 366 aa17.92■□□□□ 0.46
COMMD4-220ENST00000567720 EMC1Q8N766 993 aa17.92■□□□□ 0.46
COMMD4-220ENST00000567720 NPY6RQ99463 290 aa17.92■□□□□ 0.46
COMMD4-220ENST00000567720 ABHD10Q9NUJ1 306 aa17.92■□□□□ 0.46
COMMD4-220ENST00000567720 DDIT4Q9NX09 232 aa17.92■□□□□ 0.46
COMMD4-220ENST00000567720 ARHGAP20Q9P2F6 1191 aa17.92■□□□□ 0.46
COMMD4-220ENST00000567720 ZNF510Q9Y2H8 683 aa17.92■□□□□ 0.46
COMMD4-220ENST00000567720 NYNRINQ9P2P1 1898 aaKnown RBP17.91■□□□□ 0.46
COMMD4-220ENST00000567720 SYNJ2BP-COX16A0A087WUM0 186 aa17.91■□□□□ 0.46
COMMD4-220ENST00000567720 STK25O00506 426 aa17.91■□□□□ 0.46
COMMD4-220ENST00000567720 ATMINO43313 823 aaPredicted RBP17.91■□□□□ 0.46
COMMD4-220ENST00000567720 LATS1O95835 1130 aa17.91■□□□□ 0.46
COMMD4-220ENST00000567720 DCNP07585 359 aaKnown RBP17.91■□□□□ 0.46
COMMD4-220ENST00000567720 NOS2P35228 1153 aa17.91■□□□□ 0.46
COMMD4-220ENST00000567720 HARS2P49590 506 aaKnown RBP17.91■□□□□ 0.46
COMMD4-220ENST00000567720 SULT1E1P49888 294 aa17.91■□□□□ 0.46
COMMD4-220ENST00000567720 CLCN5P51795 746 aa17.91■□□□□ 0.46
COMMD4-220ENST00000567720 CDK17Q00537 523 aa17.91■□□□□ 0.46
COMMD4-220ENST00000567720 MESP2Q0VG99 397 aa17.91■□□□□ 0.46
COMMD4-220ENST00000567720 FZD5Q13467 585 aa17.91■□□□□ 0.46
COMMD4-220ENST00000567720 TPGS1Q6ZTW0 290 aa17.91■□□□□ 0.46
COMMD4-220ENST00000567720 MCOLN2Q8IZK6 566 aa17.91■□□□□ 0.46
COMMD4-220ENST00000567720 C3orf20Q8ND61 904 aa17.91■□□□□ 0.46
COMMD4-220ENST00000567720 JOSD2Q8TAC2 188 aa17.91■□□□□ 0.46
COMMD4-220ENST00000567720 MRFAP1L1Q96HT8 127 aa17.91■□□□□ 0.46
COMMD4-220ENST00000567720 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.91■□□□□ 0.46
COMMD4-220ENST00000567720 MARK1Q9P0L2 795 aa17.91■□□□□ 0.46
COMMD4-220ENST00000567720 COX16Q9P0S2 106 aa17.91■□□□□ 0.46
COMMD4-220ENST00000567720 DLGAP2Q9P1A6 1054 aa17.91■□□□□ 0.46
COMMD4-220ENST00000567720 STOML2Q9UJZ1 356 aa17.91■□□□□ 0.46
COMMD4-220ENST00000567720 CACNA1IQ9P0X4 2223 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 FAM170BA6NMN3 283 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 NEDD8-MDP1E9PL57 170 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 GFRA2O00451 464 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 MOCS2O96007 188 aaPredicted RBP17.9■□□□□ 0.46
COMMD4-220ENST00000567720 RRM1P23921 792 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 NR1H3Q13133 447 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 CCINQ13939 588 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 FAM133BQ5BKY9 247 aaKnown RBP17.9■□□□□ 0.46
COMMD4-220ENST00000567720 ZC3H12AQ5D1E8 599 aaKnown RBP17.9■□□□□ 0.46
COMMD4-220ENST00000567720 TMEM196Q5HYL7 178 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 NADSYN1Q6IA69 706 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 FSTL4Q6MZW2 842 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 ARCQ7LC44 396 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 ETFBKMTQ8IXQ9 262 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 CPXM2Q8N436 756 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 EZH1Q92800 747 aaPredicted RBP17.9■□□□□ 0.46
COMMD4-220ENST00000567720 BHMTQ93088 406 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 NT5C3BQ969T7 300 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 TBCBQ99426 244 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 ANP32EQ9BTT0 268 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 OSBPL6Q9BZF3 934 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 FBRSL1Q9HCM7 1045 aaKnown RBP17.9■□□□□ 0.46
COMMD4-220ENST00000567720 PIGVQ9NUD9 493 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 WDR35Q9P2L0 1181 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 XPO7Q9UIA9 1087 aaKnown RBP17.9■□□□□ 0.46
COMMD4-220ENST00000567720 STAP1Q9ULZ2 295 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 MRPS17Q9Y2R5 130 aaKnown RBP17.9■□□□□ 0.46
COMMD4-220ENST00000567720 SIT1Q9Y3P8 196 aa17.9■□□□□ 0.46
COMMD4-220ENST00000567720 BZW2Q9Y6E2 419 aaKnown RBP17.9■□□□□ 0.46
COMMD4-220ENST00000567720 MYO18AQ92614 2054 aaKnown RBP17.9■□□□□ 0.46
COMMD4-220ENST00000567720 M0QYT0 321 aa17.89■□□□□ 0.45
COMMD4-220ENST00000567720 TRDMT1O14717 391 aaKnown RBP17.89■□□□□ 0.45
COMMD4-220ENST00000567720 TPM1P09493 284 aa17.89■□□□□ 0.45
COMMD4-220ENST00000567720 CHRNB1P11230 501 aa17.89■□□□□ 0.45
COMMD4-220ENST00000567720 GZMAP12544 262 aa17.89■□□□□ 0.45
COMMD4-220ENST00000567720 SLC6A4P31645 630 aa17.89■□□□□ 0.45
COMMD4-220ENST00000567720 SGSHP51688 502 aa17.89■□□□□ 0.45
COMMD4-220ENST00000567720 ADKP55263 362 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms