RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 SERPINB9P50453 376 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 TRIM25Q14258 630 aaKnown RBP6.15□□□□□ -1.43
CNOT1-211ENST00000567188 PRMT9Q6P2P2 845 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 CAPN12Q6ZSI9 719 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 CCDC33Q8N5R6 958 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 VMP1Q96GC9 406 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 ZBTB18Q99592 522 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 TMEM245Q9H330 911 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 SMYD3Q9H7B4 428 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 TOPORSQ9NS56 1045 aaPredicted RBP6.15□□□□□ -1.43
CNOT1-211ENST00000567188 DDX18Q9NVP1 670 aaKnown RBP6.15□□□□□ -1.43
CNOT1-211ENST00000567188 TISP43B9A030 160 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 SEPT4O43236 478 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 CNMDO75829 334 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 FTCDO95954 541 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 HMBSP08397 361 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 ATP6V1B1P15313 513 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 GEMIN4P57678 1058 aaKnown RBP6.15□□□□□ -1.43
CNOT1-211ENST00000567188 GNG2P59768 71 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 EPC2Q52LR7 807 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 TTC23Q5W5X9 447 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 MZT2BQ6NZ67 158 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 RBM23Q86U06 439 aaKnown RBP6.15□□□□□ -1.43
CNOT1-211ENST00000567188 SOCS4Q8WXH5 440 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.15□□□□□ -1.434e-8■■■■■ 70.2
CNOT1-211ENST00000567188 MTG1Q9BT17 334 aaPredicted RBP6.15□□□□□ -1.43
CNOT1-211ENST00000567188 MAGEE1Q9HCI5 957 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 C20orf96Q9NUD7 363 aaPredicted RBP6.15□□□□□ -1.43
CNOT1-211ENST00000567188 A0A0G2JPF8 293 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 HNRNPCL3B7ZW38 293 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 SYNCRIPO60506 623 aaKnown RBP6.15□□□□□ -1.43
CNOT1-211ENST00000567188 MMP3P08254 477 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 PDGFRBP09619 1106 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 HNRNPCL4P0DMR1 293 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 PRIM2P49643 509 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 CDK17Q00537 523 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 CCDC85BQ15834 202 aaPredicted RBP6.15□□□□□ -1.43
CNOT1-211ENST00000567188 TMCO2Q7Z6W1 182 aaPredicted RBP6.15□□□□□ -1.43
CNOT1-211ENST00000567188 CLVS1Q8IUQ0 354 aaPredicted RBP6.15□□□□□ -1.43
CNOT1-211ENST00000567188 GDPD5Q8WTR4 605 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 BTBD9Q96Q07 612 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 TINF2Q9BSI4 451 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 QPCTLQ9NXS2 382 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 PSMC3IPQ9P2W1 217 aaPredicted RBP6.15□□□□□ -1.43
CNOT1-211ENST00000567188 SNX24Q9Y343 169 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 UMODL1Q5DID0 1318 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 SGK1O00141 431 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 SNPHO15079 494 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 SASH3O75995 380 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 F8A1P23610 371 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 GCLMP48507 274 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 ITGA1P56199 1179 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 TROAPQ12815 778 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 TP53BP2Q13625 1128 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 TRIM71Q2Q1W2 868 aaKnown RBP6.14□□□□□ -1.43
CNOT1-211ENST00000567188 SLC45A4Q5BKX6 768 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 SDE2Q6IQ49 451 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 DNAJC24Q6P3W2 148 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 ANGPTL8Q6UXH0 198 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 KIAA0408Q6ZU52 694 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 HIPK4Q8NE63 616 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 GTF3C2Q8WUA4 911 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-211ENST00000567188 TMEM237Q96Q45 408 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 ECSITQ9BQ95 431 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 ACAT2Q9BWD1 397 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 ADNPQ9H2P0 1102 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 PABPC3Q9H361 631 aaKnown RBP6.14□□□□□ -1.43
CNOT1-211ENST00000567188 MFSD1Q9H3U5 465 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 PNPLA3Q9NST1 481 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 TMEM120BA0PK00 339 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 USP1O94782 785 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 FARP2O94887 1054 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-211ENST00000567188 SPATA31D3P0C874 917 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 PORP16435 677 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-211ENST00000567188 HOXB6P17509 224 aaKnown RBP6.14□□□□□ -1.43
CNOT1-211ENST00000567188 GP5P40197 560 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 PTDSS1P48651 473 aaKnown RBP6.14□□□□□ -1.43
CNOT1-211ENST00000567188 GPC5P78333 572 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 FAPQ12884 760 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 ALKBH5Q6P6C2 394 aaKnown RBP6.14□□□□□ -1.43
CNOT1-211ENST00000567188 FOXR1Q6PIV2 292 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 SPATA31D4Q6ZUB0 917 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 SAPCD2Q86UD0 394 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 ERICH1Q86X53 443 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 GSPT2Q8IYD1 628 aaKnown RBP6.14□□□□□ -1.43
CNOT1-211ENST00000567188 FRMD8P1Q9BZ68 369 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-211ENST00000567188 ANKHQ9HCJ1 492 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 PHF11Q9UIL8 331 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 MKLN1Q9UL63 735 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 A0A087X0B3 334 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 CIITAP33076 1130 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 SLC9A3P48764 834 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 RABGGTBP53611 331 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 VCPP55072 806 aaKnown RBP6.14□□□□□ -1.43
CNOT1-211ENST00000567188 CAPRIN1Q14444 709 aaKnown RBP6.14□□□□□ -1.43
CNOT1-211ENST00000567188 CCDC149Q6ZUS6 474 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 PIK3C3Q8NEB9 887 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 TMIEQ8NEW7 156 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 CLEC4DQ8WXI8 215 aa6.14□□□□□ -1.43
CNOT1-211ENST00000567188 APBA2Q99767 749 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms