RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 GJB6O95452 261 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 F9P00740 461 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 IGLV3-27P01718 113 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 ABCB4P21439 1286 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 GBP2P32456 591 aaPredicted RBP13.15□□□□□ -0.3
SF3B3-206ENST00000565990 PTPN9P43378 593 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 KPNA1P52294 538 aaPredicted RBP13.15□□□□□ -0.3
SF3B3-206ENST00000565990 ZNF143P52747 638 aaPredicted RBP13.15□□□□□ -0.3
SF3B3-206ENST00000565990 COG7P83436 770 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 EFEMP1Q12805 493 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 NNTQ13423 1086 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 C10orf120Q5SQS8 335 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 CC2D1AQ6P1N0 951 aaPredicted RBP13.15□□□□□ -0.3
SF3B3-206ENST00000565990 DNAJC24Q6P3W2 148 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 ADHFE1Q8IWW8 467 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 CELF5Q8N6W0 485 aaKnown RBP13.15□□□□□ -0.3
SF3B3-206ENST00000565990 EMC1Q8N766 993 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 DQX1Q8TE96 717 aaKnown RBP13.15□□□□□ -0.3
SF3B3-206ENST00000565990 NXPE3Q969Y0 559 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 SLC39A13Q96H72 371 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 ADAM33Q9BZ11 813 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 ZFP14Q9HCL3 533 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 TRPC7Q9HCX4 862 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 METTL5Q9NRN9 209 aaKnown RBP13.15□□□□□ -0.3
SF3B3-206ENST00000565990 GKN1Q9NS71 199 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 CALCOCO1Q9P1Z2 691 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.15□□□□□ -0.3
SF3B3-206ENST00000565990 TLR6Q9Y2C9 796 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 HBS1LQ9Y450 684 aaKnown RBP13.15□□□□□ -0.3
SF3B3-206ENST00000565990 KIF26AQ9ULI4 1882 aaPredicted RBP13.14□□□□□ -0.31
SF3B3-206ENST00000565990 A0A0A6YYK5 440 aaPredicted RBP13.14□□□□□ -0.31
SF3B3-206ENST00000565990 RCCD1A6NED2 376 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 C2CD4DB7Z1M9 353 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 MDM4O15151 490 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 ATMINO43313 823 aaPredicted RBP13.14□□□□□ -0.31
SF3B3-206ENST00000565990 PRAMEF12O95522 483 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 TRUB2O95900 331 aaKnown RBP13.14□□□□□ -0.31
SF3B3-206ENST00000565990 MBL2P11226 248 aaPredicted RBP13.14□□□□□ -0.31
SF3B3-206ENST00000565990 PDGFRAP16234 1089 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 GPD1P21695 349 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 CXCR3P49682 368 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 HADHBP55084 474 aaKnown RBP13.14□□□□□ -0.31
SF3B3-206ENST00000565990 PITX1P78337 314 aaPredicted RBP13.14□□□□□ -0.31
SF3B3-206ENST00000565990 OGDHQ02218 1023 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 ZP2Q05996 745 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 RING1Q06587 406 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 ACAP1Q15027 740 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 TRIP4Q15650 581 aaPredicted RBP13.14□□□□□ -0.31
SF3B3-206ENST00000565990 OTUD1Q5VV17 481 aaPredicted RBP13.14□□□□□ -0.31
SF3B3-206ENST00000565990 TANGO2Q6ICL3 276 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 DCUN1D2Q6PH85 259 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 PARM1Q6UWI2 310 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 HTR3DQ70Z44 454 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 SLC35G2Q8TBE7 412 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 CTNNBL1Q8WYA6 563 aaPredicted RBP13.14□□□□□ -0.31
SF3B3-206ENST00000565990 AZIN2Q96A70 460 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 RSPRY1Q96DX4 576 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 TSGA10Q9BZW7 698 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 ACBD3Q9H3P7 528 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 SLITRK6Q9H5Y7 841 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 KIF9Q9HAQ2 790 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 LUC7LQ9NQ29 371 aaKnown RBP13.14□□□□□ -0.31
SF3B3-206ENST00000565990 PSD3Q9NYI0 1048 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 STAP1Q9ULZ2 295 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 CCL26Q9Y258 94 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 CPQQ9Y646 472 aa13.14□□□□□ -0.31
SF3B3-206ENST00000565990 E2F8A0AVK6 867 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 KCNU1A8MYU2 1149 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 M0QYT0 321 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 LEFTY2O00292 366 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 STC2O76061 302 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 IPO7O95373 1038 aaKnown RBP13.13□□□□□ -0.31
SF3B3-206ENST00000565990 CKMP06732 381 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 TFE3P19532 575 aaPredicted RBP13.13□□□□□ -0.31
SF3B3-206ENST00000565990 SDC4P31431 198 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 GBP1P32455 592 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 VIPR2P41587 438 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 ARHGAP25P42331 645 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 VAV2P52735 878 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 CKAP4Q07065 602 aaKnown RBP13.13□□□□□ -0.31
SF3B3-206ENST00000565990 ZNF252P-AS1Q0IIN9 211 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 HTR4Q13639 388 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 ZNF77Q15935 545 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 MTSS1LQ765P7 747 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 STRADAQ7RTN6 431 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 TAC4Q86UU9 113 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 DDX42Q86XP3 938 aaKnown RBP eCLIP13.13□□□□□ -0.31
SF3B3-206ENST00000565990 MIB1Q86YT6 1006 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 MFSD6LQ8IWD5 586 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 RHOT2Q8IXI1 618 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 TDRD5Q8NAT2 981 aaKnown RBP13.13□□□□□ -0.31
SF3B3-206ENST00000565990 ACRBPQ8NEB7 543 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 FGF14Q92915 247 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 CALR3Q96L12 384 aaKnown RBP13.13□□□□□ -0.31
SF3B3-206ENST00000565990 FCRL2Q96LA5 508 aaPredicted RBP13.13□□□□□ -0.31
SF3B3-206ENST00000565990 CFAP57Q96MR6 1250 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 SERPINB11Q96P15 392 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 MCEEQ96PE7 176 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 CNPY3Q9BT09 278 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 RPP25Q9BUL9 199 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms