RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 SLC12A3P55017 1021 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 GTF2BQ00403 316 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 SFSWAPQ12872 951 aaKnown RBP9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 BNIP3Q12983 259 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 ZNF234Q14588 700 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 EIF4HQ15056 248 aaKnown RBP9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 SLC45A4Q5BKX6 768 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 ARSHQ5FYA8 562 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 KIAA0895LQ68EN5 471 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 SERPINA13PQ6UXR4 307 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 DTHD1Q6ZMT9 781 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 LIMS2Q7Z4I7 341 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 CACUL1Q86Y37 369 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 OXR1Q8N573 874 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 POMGNT1Q8WZA1 660 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 BHMTQ93088 406 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 SEMA3CQ99985 751 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 KLF16Q9BXK1 252 aaPredicted RBP9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 ELOVL4Q9GZR5 314 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 SNX25Q9H3E2 840 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 ERVMER34-1Q9H9K5 563 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 PARVGQ9HBI0 331 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 AASDHPPTQ9NRN7 309 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 PLK2Q9NYY3 685 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 NOL7Q9UMY1 257 aaKnown RBP9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 PLA2G4CQ9UP65 541 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 PCDHB1Q9Y5F3 818 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 PP2D1A8MPX8 630 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 H3BQV1 296 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 TLR4O00206 839 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 GREM1O60565 184 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 TLR5O60602 858 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 GJB6O95452 261 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 LDHAP00338 332 aaKnown RBP9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 FAM163BP0C2L3 166 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 WARSP23381 471 aaKnown RBP9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 EPHA8P29322 1005 aaPredicted RBP9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 CHKAP35790 457 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 PLA2G4AP47712 749 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 MFAP3P55082 362 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 NFKB2Q00653 900 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 CAMK2GQ13555 558 aaPredicted RBP9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 GNL2Q13823 731 aaKnown RBP9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 GEN1Q17RS7 908 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 IGF2-ASQ6U949 168 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 GANCQ8TET4 914 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 KBTBD7Q8WVZ9 684 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 GOLGA1Q92805 767 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 HPDLQ96IR7 371 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 CDK5RAP3Q96JB5 506 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 ORAI3Q9BRQ5 295 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 FAM213AQ9BRX8 229 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 CIPCQ9C0C6 399 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 ABCG4Q9H172 646 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 ZHX3Q9H4I2 956 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 FBRSQ9HAH7 460 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 ZNF510Q9Y2H8 683 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 COL5A1P20908 1838 aaPredicted RBP9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 SCN1AP35498 2009 aa9.53□□□□□ -0.88
VPS9D1-205ENST00000565452 FAM47DPA6NHR8 397 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 OPA1O60313 960 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 OBSL1O75147 1896 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 ITGB2P05107 769 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 KRT18P05783 430 aaKnown RBP9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 IGHV4-34P06331 123 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 ZDHHC11BP0C7U3 371 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 C7P10643 843 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 ITGB6P18564 788 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 PRKCHP24723 683 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 ANP32AP39687 249 aaKnown RBP9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 DAB2P98082 770 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 GUCY1B3Q02153 619 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 TLE1Q04724 770 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 MAPK8IP2Q13387 824 aaPredicted RBP9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 ZNF211Q13398 564 aaPredicted RBP9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 PROX2Q3B8N5 592 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 LINC00303Q3SY05 128 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 TTC31Q49AM3 519 aaPredicted RBP9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 HYIQ5T013 277 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 SFMBT2Q5VUG0 894 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 CDCP2Q5VXM1 449 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 USP53Q70EK8 1073 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 ANKS1BQ7Z6G8 1248 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 OR6B3Q8NGW1 331 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 SCAMP5Q8TAC9 235 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 CXorf38Q8TB03 319 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 GRAMD1AQ96CP6 724 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 ANKRD36BP1Q96IX9 119 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 PIWIL1Q96J94 861 aaKnown RBP9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 SLC6A18Q96N87 628 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 SLC46A1Q96NT5 459 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 PSMG3-AS1Q96PY0 264 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 CCNL2Q96S94 520 aaPredicted RBP9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 PLIN2Q99541 437 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 MMTAG2Q9BU76 263 aaKnown RBP9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 LRRC4CQ9HCJ2 640 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 ASCL3Q9NQ33 180 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 TLR8Q9NR97 1041 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms