RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 IL23AQ9NPF7 189 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 COMMD8Q9NX08 183 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 ATP8A1Q9Y2Q0 1164 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 FAM92AA1XBS5 289 aa20.28■□□□□ 0.84
CLN6-205ENST00000564846 SOD2P04179 222 aa20.28■□□□□ 0.84
CLN6-205ENST00000564846 ZSCAN5DPP0CG00 497 aa20.28■□□□□ 0.84
CLN6-205ENST00000564846 ACRP10323 421 aa20.28■□□□□ 0.84
CLN6-205ENST00000564846 RPL10AP62906 217 aaKnown RBP20.28■□□□□ 0.84
CLN6-205ENST00000564846 GPS1Q13098 491 aa20.28■□□□□ 0.84
CLN6-205ENST00000564846 EIF4EBP2Q13542 120 aaPredicted RBP20.28■□□□□ 0.84
CLN6-205ENST00000564846 PSMD5Q16401 504 aa20.28■□□□□ 0.84
CLN6-205ENST00000564846 SDHAF4Q5VUM1 108 aa20.28■□□□□ 0.84
CLN6-205ENST00000564846 FAM117BQ6P1L5 589 aa20.28■□□□□ 0.84
CLN6-205ENST00000564846 DENND5BQ6ZUT9 1274 aa20.28■□□□□ 0.84
CLN6-205ENST00000564846 BZW1Q7L1Q6 419 aaKnown RBP20.28■□□□□ 0.84
CLN6-205ENST00000564846 PRUNE1Q86TP1 453 aa20.28■□□□□ 0.84
CLN6-205ENST00000564846 ZC3H18Q86VM9 953 aaKnown RBP20.28■□□□□ 0.84
CLN6-205ENST00000564846 TMEM169Q96HH4 297 aa20.28■□□□□ 0.84
CLN6-205ENST00000564846 CEP295NLQ96MC4 621 aa20.28■□□□□ 0.84
CLN6-205ENST00000564846 ZIM3Q96PE6 472 aa20.28■□□□□ 0.84
CLN6-205ENST00000564846 SEPT5Q99719 369 aaPredicted RBP20.28■□□□□ 0.84
CLN6-205ENST00000564846 FOXP3Q9BZS1 431 aa20.28■□□□□ 0.84
CLN6-205ENST00000564846 SMOC2Q9H3U7 446 aa20.28■□□□□ 0.84
CLN6-205ENST00000564846 NMUR1Q9HB89 426 aa20.28■□□□□ 0.84
CLN6-205ENST00000564846 SLC27A5Q9Y2P5 690 aa20.28■□□□□ 0.84
CLN6-205ENST00000564846 CFAP69A5D8W1 941 aa20.27■□□□□ 0.84
CLN6-205ENST00000564846 H7C0C1 242 aa20.27■□□□□ 0.84
CLN6-205ENST00000564846 DNALI1O14645 258 aaPredicted RBP20.27■□□□□ 0.84
CLN6-205ENST00000564846 IRAK2O43187 625 aa20.27■□□□□ 0.84
CLN6-205ENST00000564846 VNN2O95498 520 aa20.27■□□□□ 0.84
CLN6-205ENST00000564846 OAS2P29728 719 aaKnown RBP20.27■□□□□ 0.84
CLN6-205ENST00000564846 ATP5OP48047 213 aa20.27■□□□□ 0.84
CLN6-205ENST00000564846 FAM193AP78312 1265 aa20.27■□□□□ 0.84
CLN6-205ENST00000564846 DUSP4Q13115 394 aa20.27■□□□□ 0.84
CLN6-205ENST00000564846 XRCC4Q13426 336 aa20.27■□□□□ 0.84
CLN6-205ENST00000564846 UAP1Q16222 522 aaPredicted RBP20.27■□□□□ 0.84
CLN6-205ENST00000564846 HIBCHQ6NVY1 386 aaPredicted RBP20.27■□□□□ 0.84
CLN6-205ENST00000564846 TMCO2Q7Z6W1 182 aaPredicted RBP20.27■□□□□ 0.84
CLN6-205ENST00000564846 UNC45BQ8IWX7 931 aa20.27■□□□□ 0.84
CLN6-205ENST00000564846 UBLCP1Q8WVY7 318 aaPredicted RBP20.27■□□□□ 0.84
CLN6-205ENST00000564846 TKTL2Q9H0I9 626 aa20.27■□□□□ 0.84
CLN6-205ENST00000564846 ARHGEF4Q9NR80 690 aa20.27■□□□□ 0.84
CLN6-205ENST00000564846 TMPRSS4Q9NRS4 437 aa20.27■□□□□ 0.84
CLN6-205ENST00000564846 TPX2Q9ULW0 747 aaKnown RBP20.27■□□□□ 0.84
CLN6-205ENST00000564846 KIAA0100Q14667 2235 aaKnown RBP20.27■□□□□ 0.84
CLN6-205ENST00000564846 A0A1W2PQH9 124 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 BCLAF3A2AJT9 711 aaKnown RBP20.26■□□□□ 0.83
CLN6-205ENST00000564846 H3BQF6 201 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 OPA1O60313 960 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 SYF2O95926 243 aaKnown RBP20.26■□□□□ 0.83
CLN6-205ENST00000564846 RARGP13631 454 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 ETS1P14921 441 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 AMPD1P23109 780 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 YWHAQP27348 245 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 HCAR3P49019 387 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 PMS2P54278 862 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 GDF10P55107 478 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 BRMS1LQ5PSV4 323 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 NCBP2-AS2Q69YL0 99 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 LRIG3Q6UXM1 1119 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 CEP128Q6ZU80 1094 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 RFX8Q6ZV50 586 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 PCGF5Q86SE9 256 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 FAM71DQ8N9W8 422 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 WDR27A2RRH5 827 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 EEF2KO00418 725 aaKnown RBP20.26■□□□□ 0.83
CLN6-205ENST00000564846 CREB3O43889 395 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 USP46P62068 366 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 SEMA3BQ13214 749 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 UBE2Q1Q7Z7E8 422 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 CDKL3Q8IVW4 592 aaPredicted RBP20.26■□□□□ 0.83
CLN6-205ENST00000564846 GOLGA6L1Q8N7Z2 621 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 COLGALT1Q8NBJ5 622 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 RNF34Q969K3 372 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 YME1L1Q96TA2 773 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 ADAM7Q9H2U9 754 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 CRISPLD1Q9H336 500 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 PABPC3Q9H361 631 aaKnown RBP20.26■□□□□ 0.83
CLN6-205ENST00000564846 C10orf88Q9H8K7 445 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 ANLNQ9NQW6 1124 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 SPG21Q9NZD8 308 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 PLAAQ9Y263 795 aa20.26■□□□□ 0.83
CLN6-205ENST00000564846 MRPL42Q9Y6G3 142 aaKnown RBP20.26■□□□□ 0.83
CLN6-205ENST00000564846 I6L893 689 aaPredicted RBP20.25■□□□□ 0.83
CLN6-205ENST00000564846 OR1D2P34982 312 aa20.25■□□□□ 0.83
CLN6-205ENST00000564846 GLUD2P49448 558 aa20.25■□□□□ 0.83
CLN6-205ENST00000564846 PSEN1P49768 467 aa20.25■□□□□ 0.83
CLN6-205ENST00000564846 CBX1P83916 185 aa20.25■□□□□ 0.83
CLN6-205ENST00000564846 DSG1Q02413 1049 aa20.25■□□□□ 0.83
CLN6-205ENST00000564846 GBE1Q04446 702 aa20.25■□□□□ 0.83
CLN6-205ENST00000564846 DPYSQ14117 519 aa20.25■□□□□ 0.83
CLN6-205ENST00000564846 MORF4L2Q15014 288 aa20.25■□□□□ 0.83
CLN6-205ENST00000564846 OTOP2Q7RTS6 562 aa20.25■□□□□ 0.83
CLN6-205ENST00000564846 RTP4Q96DX8 246 aa20.25■□□□□ 0.83
CLN6-205ENST00000564846 SH3GL2Q99962 352 aa20.25■□□□□ 0.83
CLN6-205ENST00000564846 HERC2P3Q9BVR0 1158 aa20.25■□□□□ 0.83
CLN6-205ENST00000564846 ARHGEF38Q9NXL2 777 aa20.25■□□□□ 0.83
CLN6-205ENST00000564846 CLIC5Q9NZA1 410 aa20.25■□□□□ 0.83
CLN6-205ENST00000564846 PRKAG2Q9UGJ0 569 aa20.25■□□□□ 0.83
CLN6-205ENST00000564846 ADAM12O43184 909 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms