RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 DCUN1D1Q96GG9 259 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 BTBD7Q9P203 1132 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 PPME1Q9Y570 386 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 NOP56O00567 594 aaKnown RBP21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 SNNO75324 88 aaPredicted RBP21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ZNF132P52740 706 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 OLIG2Q13516 323 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 GJD4Q96KN9 370 aaPredicted RBP21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 NIF3L1Q9GZT8 377 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 WDR55Q9H6Y2 383 aaPredicted RBP21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 USP29Q9HBJ7 922 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ZNF70Q9UC06 446 aaPredicted RBP21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 TDRKHQ9Y2W6 561 aaKnown RBP21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ZBTB14O43829 449 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 PDGFRAP16234 1089 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 FDFT1P37268 417 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 CCR10P46092 362 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 NUDT2P50583 147 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 JPH1Q9HDC5 661 aaPredicted RBP21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 BTAF1O14981 1849 aa21.14■□□□□ 0.98
MAP1LC3B-206ENST00000564844 H3BSA7 217 aa21.14■□□□□ 0.98
MAP1LC3B-206ENST00000564844 M0QYV0 167 aa21.14■□□□□ 0.98
MAP1LC3B-206ENST00000564844 GJB1P08034 283 aa21.14■□□□□ 0.98
MAP1LC3B-206ENST00000564844 SMIM18P0DKX4 95 aa21.14■□□□□ 0.98
MAP1LC3B-206ENST00000564844 AOC1P19801 751 aa21.14■□□□□ 0.98
MAP1LC3B-206ENST00000564844 SAT1P21673 171 aa21.14■□□□□ 0.98
MAP1LC3B-206ENST00000564844 TGFB2P61812 414 aa21.14■□□□□ 0.98
MAP1LC3B-206ENST00000564844 CLDN10P78369 228 aa21.14■□□□□ 0.98
MAP1LC3B-206ENST00000564844 NRF1Q16656 503 aa21.14■□□□□ 0.98
MAP1LC3B-206ENST00000564844 MYLK3Q32MK0 819 aa21.14■□□□□ 0.98
MAP1LC3B-206ENST00000564844 KYAT3Q6YP21 454 aaKnown RBP21.14■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ZSCAN18Q8TBC5 510 aaPredicted RBP21.14■□□□□ 0.98
MAP1LC3B-206ENST00000564844 CHCHD3Q9NX63 227 aaKnown RBP21.14■□□□□ 0.98
MAP1LC3B-206ENST00000564844 RGS20O76081 388 aa21.14■□□□□ 0.97
MAP1LC3B-206ENST00000564844 POLR2BP30876 1174 aaKnown RBP21.14■□□□□ 0.97
MAP1LC3B-206ENST00000564844 WASHC5Q12768 1159 aa21.14■□□□□ 0.97
MAP1LC3B-206ENST00000564844 AMIGO2Q86SJ2 522 aa21.14■□□□□ 0.97
MAP1LC3B-206ENST00000564844 XYLT1Q86Y38 959 aa21.14■□□□□ 0.97
MAP1LC3B-206ENST00000564844 CCDC78A2IDD5 438 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 PSAPP07602 524 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SRGAP2BP0DMP2 458 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 FGF3P11487 239 aaPredicted RBP21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 ATXN1P54253 815 aaKnown RBP21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 HNRNPDQ14103 355 aaKnown RBP21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 PPP2R5DQ14738 602 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 NOMO1Q15155 1222 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 RXFP2Q8WXD0 754 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 DGCR14Q96DF8 476 aaKnown RBP21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 MRPL1Q9BYD6 325 aaKnown RBP21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 TMEM216Q9P0N5 145 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 EMCNQ9ULC0 261 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 H3BNX3 289 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 TBC1D12O60347 775 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SLC9B1Q4ZJI4 515 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 MBLAC2Q68D91 279 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 TRNP1Q6NT89 227 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 PLD5Q8N7P1 536 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 GRIN3AQ8TCU5 1115 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 PPP4R1Q8TF05 950 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 ATG4CQ96DT6 458 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 LENG8Q96PV6 779 aaPredicted RBP21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 UNKQ9C0B0 810 aaKnown RBP21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SEMA6AQ9H2E6 1030 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 TTC36A6NLP5 189 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 XPO1O14980 1071 aaKnown RBP21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 GSRP00390 522 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 TCF7P36402 384 aaPredicted RBP21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SP2Q02086 613 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 PDE1CQ14123 709 aaPredicted RBP21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 Q3C1V9 767 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SPNS2Q8IVW8 549 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 TMEM192Q8IY95 271 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 DTNBP1Q96EV8 351 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 KLC2Q9H0B6 622 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 MFHAS1Q9Y4C4 1052 aa21.13■□□□□ 0.97
MAP1LC3B-206ENST00000564844 DOCK5Q9H7D0 1870 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 PRPSAP2O60256 369 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 ALDOAP04075 364 aaKnown RBP21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 ENO3P13929 434 aaPredicted RBP21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 EIF4BP23588 611 aaKnown RBP21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 PTPN7P35236 360 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 TMEM62Q0P6H9 643 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 FSTL1Q12841 308 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 LCA5Q86VQ0 697 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 LRRC71Q8N4P6 559 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 MAPK15Q8TD08 544 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 CDRT15Q96T59 188 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 RSAD1Q9HA92 442 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 RNF146Q9NTX7 359 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 AP4B1Q9Y6B7 739 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 FOXD2O60548 495 aaPredicted RBP21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 DNAJA2O60884 412 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 FGFR3P22607 806 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 RPL10P27635 214 aaKnown RBP21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 CRHR1P34998 444 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 GBE1Q04446 702 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 AAGABQ6PD74 315 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 ZBTB46Q86UZ6 589 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 FBXW8Q8N3Y1 598 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms