RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 FCRL5Q96RD9 977 aa5.6□□□□□ -1.51
UBR1-205ENST00000564540 FNIP2Q9P278 1114 aa5.6□□□□□ -1.51
UBR1-205ENST00000564540 CCDC187A0A096LP49 1063 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 OR2W5A6NFC9 320 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 M0QZQ0 153 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 PRYO14603 147 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 INPPL1O15357 1258 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 TLR2O60603 784 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 BMP15O95972 392 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 PLAUP00749 431 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 VIPP01282 170 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 KRT18P05783 430 aaKnown RBP5.59□□□□□ -1.51
UBR1-205ENST00000564540 CTSAP10619 480 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 EEF1GP26641 437 aaKnown RBP5.59□□□□□ -1.51
UBR1-205ENST00000564540 DUSP1P28562 367 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 IDUAP35475 653 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 VPS41P49754 854 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 NEK3P51956 506 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 ID2Q02363 134 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 ELF2Q15723 593 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 MAPKAPK3Q16644 382 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 FAM110CQ1W6H9 321 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 TRIM71Q2Q1W2 868 aaKnown RBP5.59□□□□□ -1.51
UBR1-205ENST00000564540 P3H1Q32P28 736 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 SLC9C1Q4G0N8 1177 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 HSP90AB2PQ58FF8 381 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 KRT73Q86Y46 540 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 BRI3BPQ8WY22 251 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 AKAP1Q92667 903 aaKnown RBP eCLIP5.59□□□□□ -1.51
UBR1-205ENST00000564540 ZNF566Q969W8 418 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 CCDC136Q96JN2 1154 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 TMEM79Q9BSE2 394 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 SCNM1Q9BWG6 230 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 ARNT2Q9HBZ2 717 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 ASNSD1Q9NWL6 643 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 GEMIN8Q9NWZ8 242 aaKnown RBP5.59□□□□□ -1.51
UBR1-205ENST00000564540 PHTF1Q9UMS5 762 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 PCDHGB2Q9Y5G2 931 aa5.59□□□□□ -1.51
UBR1-205ENST00000564540 SIRT4Q9Y6E7 314 aaPredicted RBP5.59□□□□□ -1.51
UBR1-205ENST00000564540 PODXLO00592 558 aa5.58□□□□□ -1.52
UBR1-205ENST00000564540 CAND2O75155 1236 aa5.58□□□□□ -1.52
UBR1-205ENST00000564540 SRGAP2BP0DMP2 458 aa5.58□□□□□ -1.52
UBR1-205ENST00000564540 NDUFS1P28331 727 aa5.58□□□□□ -1.52
UBR1-205ENST00000564540 GSTM5P46439 218 aa5.58□□□□□ -1.52
UBR1-205ENST00000564540 RPS13P62277 151 aaKnown RBP5.58□□□□□ -1.52
UBR1-205ENST00000564540 NSUN2Q08J23 767 aaKnown RBP eCLIP5.58□□□□□ -1.52
UBR1-205ENST00000564540 STIM1Q13586 685 aa5.58□□□□□ -1.52
UBR1-205ENST00000564540 IZUMO3Q5VZ72 239 aa5.58□□□□□ -1.52
UBR1-205ENST00000564540 CCDC144NLQ6NUI1 221 aa5.58□□□□□ -1.52
UBR1-205ENST00000564540 TLDC1Q6P9B6 456 aa5.58□□□□□ -1.52
UBR1-205ENST00000564540 FBXO38Q6PIJ6 1188 aa5.58□□□□□ -1.52
UBR1-205ENST00000564540 KYAT3Q6YP21 454 aaKnown RBP5.58□□□□□ -1.52
UBR1-205ENST00000564540 C11orf96Q7Z7L8 435 aa5.58□□□□□ -1.52
UBR1-205ENST00000564540 KIAA1191Q96A73 305 aa5.58□□□□□ -1.52
UBR1-205ENST00000564540 CCDC138Q96M89 665 aa5.58□□□□□ -1.52
UBR1-205ENST00000564540 EIF2AQ9BY44 585 aaKnown RBP5.58□□□□□ -1.52
UBR1-205ENST00000564540 CERS4Q9HA82 394 aa5.58□□□□□ -1.52
UBR1-205ENST00000564540 FSCN3Q9NQT6 498 aa5.58□□□□□ -1.52
UBR1-205ENST00000564540 SLC22A23A1A5C7 686 aa5.57□□□□□ -1.52
UBR1-205ENST00000564540 C2CD4BA6NLJ0 364 aa5.57□□□□□ -1.52
UBR1-205ENST00000564540 J3KTA2 159 aa5.57□□□□□ -1.52
UBR1-205ENST00000564540 SOCS2O14508 198 aa5.57□□□□□ -1.52
UBR1-205ENST00000564540 CTIFO43310 598 aaKnown RBP5.57□□□□□ -1.52
UBR1-205ENST00000564540 DHHO43323 396 aa5.57□□□□□ -1.52
UBR1-205ENST00000564540 PRC1O43663 620 aa5.57□□□□□ -1.52
UBR1-205ENST00000564540 HOXA7P31268 230 aaPredicted RBP5.57□□□□□ -1.52
UBR1-205ENST00000564540 CPA2P48052 419 aa5.57□□□□□ -1.52
UBR1-205ENST00000564540 PLCD1P51178 756 aa5.57□□□□□ -1.52
UBR1-205ENST00000564540 AK2P54819 239 aa5.57□□□□□ -1.52
UBR1-205ENST00000564540 TBX4P57082 545 aa5.57□□□□□ -1.52
UBR1-205ENST00000564540 HSF1Q00613 529 aa5.57□□□□□ -1.52
UBR1-205ENST00000564540 MTA1Q13330 715 aa5.57□□□□□ -1.52
UBR1-205ENST00000564540 MPEG1Q2M385 716 aa5.57□□□□□ -1.52
UBR1-205ENST00000564540 DEF8Q6ZN54 512 aa5.57□□□□□ -1.52
UBR1-205ENST00000564540 MRPL10Q7Z7H8 261 aaKnown RBP5.57□□□□□ -1.52
UBR1-205ENST00000564540 PIP4P1Q86T03 277 aa5.57□□□□□ -1.52
UBR1-205ENST00000564540 ANKRD13BQ86YJ7 626 aa5.57□□□□□ -1.52
UBR1-205ENST00000564540 WIPF2Q8TF74 440 aaPredicted RBP5.57□□□□□ -1.52
UBR1-205ENST00000564540 PIGKQ92643 395 aa5.57□□□□□ -1.52
UBR1-205ENST00000564540 C18orf8Q96DM3 657 aa5.57□□□□□ -1.52
UBR1-205ENST00000564540 TRMT61AQ96FX7 289 aaKnown RBP5.57□□□□□ -1.52
UBR1-205ENST00000564540 HMCESQ96FZ2 354 aa5.57□□□□□ -1.52
UBR1-205ENST00000564540 EIF3CQ99613 913 aaKnown RBP5.57□□□□□ -1.52
UBR1-205ENST00000564540 GATA5Q9BWX5 397 aaPredicted RBP5.57□□□□□ -1.52
UBR1-205ENST00000564540 ZMYM2Q9UBW7 1377 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 LY6G6EA0A0G2JKS1 128 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 MYL1P05976 194 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 SLC3A2P08195 630 aaKnown RBP5.56□□□□□ -1.52
UBR1-205ENST00000564540 ST6GAL1P15907 406 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 MATN1P21941 496 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 MMP8P22894 467 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 HOXD12P35452 270 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 HSPA7P48741 367 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 AGTR2P50052 363 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 PICALMQ13492 652 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 AWAT2Q6E213 333 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 MSANTD2Q6P1R3 559 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 ACSM6Q6P461 480 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 C16orf89Q6UX73 402 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 RBM44Q6ZP01 1051 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms