RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 NEK10Q6ZWH5 1172 aa11.54□□□□□ -0.56
RPAP1-204ENST00000562303 SLC22A9Q8IVM8 553 aa11.54□□□□□ -0.56
RPAP1-204ENST00000562303 MDM1Q8TC05 714 aa11.54□□□□□ -0.56
RPAP1-204ENST00000562303 USP6NLQ92738 828 aa11.54□□□□□ -0.56
RPAP1-204ENST00000562303 DNAJC1Q96KC8 554 aaKnown RBP11.54□□□□□ -0.56
RPAP1-204ENST00000562303 ERGIC2Q96RQ1 377 aa11.54□□□□□ -0.56
RPAP1-204ENST00000562303 ROGDIQ9GZN7 287 aa11.54□□□□□ -0.56
RPAP1-204ENST00000562303 EVA1BQ9NVM1 165 aa11.54□□□□□ -0.56
RPAP1-204ENST00000562303 INTS13Q9NVM9 706 aa11.54□□□□□ -0.56
RPAP1-204ENST00000562303 POLLQ9UGP5 575 aa11.54□□□□□ -0.56
RPAP1-204ENST00000562303 POLG2Q9UHN1 485 aa11.54□□□□□ -0.56
RPAP1-204ENST00000562303 DNAJC16Q9Y2G8 782 aa11.54□□□□□ -0.56
RPAP1-204ENST00000562303 SPATA31A5Q5VU36 1347 aa11.54□□□□□ -0.56
RPAP1-204ENST00000562303 SPATA31A7Q8IWB4 1347 aa11.54□□□□□ -0.56
RPAP1-204ENST00000562303 PPP1R3GB7ZBB8 358 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 KPNA3O00505 521 aaPredicted RBP11.53□□□□□ -0.56
RPAP1-204ENST00000562303 SREBF1P36956 1147 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 CCZ1BP86790 482 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 CCZ1P86791 482 aaPredicted RBP11.53□□□□□ -0.56
RPAP1-204ENST00000562303 PPIL2Q13356 520 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 POU6F1Q14863 301 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 MAP1SQ66K74 1059 aaPredicted RBP11.53□□□□□ -0.56
RPAP1-204ENST00000562303 COL23A1Q86Y22 540 aaPredicted RBP11.53□□□□□ -0.56
RPAP1-204ENST00000562303 EPHX4Q8IUS5 362 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 HOMEZQ8IX15 550 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 VPS33AQ96AX1 596 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 ZDHHC15Q96MV8 337 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 DPY30Q9C005 99 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 VTA1Q9NP79 307 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 AVENQ9NQS1 362 aaPredicted RBP11.53□□□□□ -0.56
RPAP1-204ENST00000562303 CCT8L1PA6NM43 557 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 NCAM2O15394 837 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 HSMCR30P0CW71 290 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 AKR1A1P14550 325 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 ZNF7P17097 686 aaPredicted RBP11.53□□□□□ -0.56
RPAP1-204ENST00000562303 NFIAQ12857 509 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 MAPK7Q13164 816 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 MTA1Q13330 715 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 XRCC4Q13426 336 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 LGI2Q8N0V4 545 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 TDRD5Q8NAT2 981 aaKnown RBP11.53□□□□□ -0.56
RPAP1-204ENST00000562303 KCTD14Q9BQ13 255 aaPredicted RBP11.53□□□□□ -0.56
RPAP1-204ENST00000562303 MTFR1LQ9H019 292 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 ZFYVE1Q9HBF4 777 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 LAMC1P11047 1609 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 FAM25AB3EWG3 89 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 FAM25CB3EWG5 89 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 FAM25GB3EWG6 89 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 RAD51BO15315 384 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 NDUFS2O75306 463 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 LSM8O95777 96 aaKnown RBP11.53□□□□□ -0.56
RPAP1-204ENST00000562303 SARSP49591 514 aaKnown RBP11.53□□□□□ -0.56
RPAP1-204ENST00000562303 TUBP50607 506 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 GRIK3Q13003 919 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 GATAD2AQ86YP4 633 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 DNERQ8NFT8 737 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 TMC2Q8TDI7 906 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 C19orf60Q96EN9 201 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 TMEM121Q9BTD3 319 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 NCKIPSDQ9NZQ3 722 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 TULP4Q9NRJ4 1543 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 POLR2EP19388 210 aaKnown RBP11.53□□□□□ -0.56
RPAP1-204ENST00000562303 CNTFP26441 200 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 HERVK_113P62684 666 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 NFIL3Q16649 462 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 ERMARDQ5T6L9 678 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 HMX1Q9NP08 348 aaPredicted RBP11.53□□□□□ -0.56
RPAP1-204ENST00000562303 ADAM30Q9UKF2 790 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 ZDHHC9Q9Y397 364 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 UMPSP11172 480 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 ST13P50502 369 aaKnown RBP11.53□□□□□ -0.56
RPAP1-204ENST00000562303 CCR4P51679 360 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 CSNK2BP67870 215 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 ADIGQ0VDE8 80 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 C1DQ13901 141 aaKnown RBP11.53□□□□□ -0.56
RPAP1-204ENST00000562303 CCDC92Q53HC0 331 aaPredicted RBP11.53□□□□□ -0.56
RPAP1-204ENST00000562303 MOXD1Q6UVY6 613 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 BNIPLQ7Z465 357 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 RNASE11Q8TAA1 199 aaKnown RBP11.53□□□□□ -0.56
RPAP1-204ENST00000562303 EPS8L3Q8TE67 593 aaKnown RBP11.53□□□□□ -0.56
RPAP1-204ENST00000562303 SUSD6Q92537 303 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 RNFT2Q96EX2 444 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 SMARCD1Q96GM5 515 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 RNF208Q9H0X6 261 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 RSPH9Q9H1X1 276 aaPredicted RBP11.53□□□□□ -0.56
RPAP1-204ENST00000562303 EXO5Q9H790 373 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 PRKAG3Q9UGI9 489 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 PPIEQ9UNP9 301 aaKnown RBP11.53□□□□□ -0.56
RPAP1-204ENST00000562303 TFR2Q9UP52 801 aa11.53□□□□□ -0.56
RPAP1-204ENST00000562303 SLCO1B7G3V0H7 640 aa11.52□□□□□ -0.56
RPAP1-204ENST00000562303 O00370 1275 aa11.52□□□□□ -0.56
RPAP1-204ENST00000562303 RTN3O95197 1032 aaPredicted RBP11.52□□□□□ -0.56
RPAP1-204ENST00000562303 PARNO95453 639 aaKnown RBP11.52□□□□□ -0.56
RPAP1-204ENST00000562303 PABPC1P11940 636 aaKnown RBP11.52□□□□□ -0.56
RPAP1-204ENST00000562303 CPA3P15088 417 aa11.52□□□□□ -0.56
RPAP1-204ENST00000562303 TALDO1P37837 337 aa11.52□□□□□ -0.56
RPAP1-204ENST00000562303 THOP1P52888 689 aa11.52□□□□□ -0.56
RPAP1-204ENST00000562303 SKP1P63208 163 aa11.52□□□□□ -0.56
RPAP1-204ENST00000562303 CRYMQ14894 314 aa11.52□□□□□ -0.56
RPAP1-204ENST00000562303 C16orf59Q7L2K0 433 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 200.1 ms