RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 TEX13BQ9BXU2 312 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 INO80BQ9C086 356 aaPredicted RBP14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 RPF1Q9H9Y2 349 aaKnown RBP14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 PCDH18Q9HCL0 1135 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 MYOZ2Q9NPC6 264 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 SLC17A6Q9P2U8 582 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 B4GALT4O60513 344 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 CCNT2O60583 730 aaKnown RBP14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 APBA3O96018 575 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 ITGB3P05106 788 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 RGS7P49802 495 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 PRKG1Q13976 671 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 CCNIQ14094 377 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 BOLA3Q53S33 107 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 TCHHL1Q5QJ38 904 aaPredicted RBP14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 ATF7IP2Q5U623 682 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 IER5Q5VY09 327 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 FAM160B1Q5W0V3 765 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 RNF111Q6ZNA4 994 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 TMEM192Q8IY95 271 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 DEFB107AQ8IZN7 70 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 TEPSINQ96N21 525 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 PNPOQ9NVS9 261 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 SIX4Q9UIU6 781 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 IRF6O14896 467 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 CILPO75339 1184 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 NFICP08651 508 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 FGF3P11487 239 aaPredicted RBP14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 OAZ1P54368 228 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 CNTN2Q02246 1040 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 CA9Q16790 459 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 RABGAP1LQ5R372 815 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 PDPK2PQ6A1A2 396 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 ILDR2Q71H61 639 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 CDKL3Q8IVW4 592 aaPredicted RBP14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 NME8Q8N427 588 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 NLRP4Q96MN2 994 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 ZDHHC7Q9NXF8 308 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 CDH22Q9UJ99 828 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 ITGA11Q9UKX5 1188 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 SIP14410 1827 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 TPP1O14773 563 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 B4GALT5O43286 388 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 GLRA3O75311 464 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 VCLP18206 1134 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 UBA1P22314 1058 aaKnown RBP14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 CNTFP26441 200 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 MAGEA6P43360 314 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 DLG1Q12959 904 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 PEX6Q13608 980 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 GRAMD1BQ3KR37 738 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 EEF1DP3Q658K8 133 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 ZNF534Q76KX8 674 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 ARHGAP22Q7Z5H3 698 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 NIM1KQ8IY84 436 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 C1orf127Q8N9H9 656 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 JADE3Q92613 823 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 CMTM5Q96DZ9 223 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 NDNQ99608 321 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 EPAS1Q99814 870 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 STN1Q9H668 368 aaKnown RBP14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 IFT122Q9HBG6 1241 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 STK32BQ9NY57 414 aa14.41□□□□□ -0.1
VPS9D1-202ENST00000561976 WDR27A2RRH5 827 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 SERPINE1P05121 402 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 VDRP11473 427 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 RAG1P15918 1043 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 TCF7P36402 384 aaPredicted RBP14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 IDH3AP50213 366 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 CRADDP78560 199 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 CBLBQ13191 982 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 MSLNQ13421 630 aaPredicted RBP14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 TNFAIP1Q13829 316 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 CCDC14Q49A88 953 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 VWA5B1Q5TIE3 1220 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 TIFABQ6ZNK6 161 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 HPS6Q86YV9 775 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 RTKN2Q8IZC4 609 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 SNRNP25Q9BV90 132 aaKnown RBP14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 EMCNQ9ULC0 261 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 SLC4A7Q9Y6M7 1214 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 IGKV6D-21A0A0A0MT36 114 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 ZMPSTE24O75844 475 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 GSRP00390 522 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 ADORA2AP29274 412 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 PDE1CQ14123 709 aaPredicted RBP14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 MXD4Q14582 209 aaPredicted RBP14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 C10orf107Q8IVU9 208 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 ACTRT2Q8TDY3 377 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 CDKL2Q92772 493 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 ZBED3Q96IU2 234 aaPredicted RBP14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 GCOM2Q9BZD3 368 aaPredicted RBP14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 BTBD7Q9P203 1132 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 POMPQ9Y244 141 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 COMMD3-BMI1R4GMX3 469 aa14.4□□□□□ -0.1
VPS9D1-202ENST00000561976 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 PLIN3O60664 434 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 ALDOAP04075 364 aaKnown RBP14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 CYP2F1P24903 491 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 SDC4P31431 198 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms