RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	LMNTD2	Q8IXW0	634 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	ADGRG5	Q8IZF4	528 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	B3GALNT2	Q8NCR0	500 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	POF1B	Q8WVV4	589 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	BRI3BP	Q8WY22	251 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	MUL1	Q969V5	352 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	SKA1	Q96BD8	255 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	CHFR	Q96EP1	664 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	BOD1	Q96IK1	185 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	LRIG1	Q96JA1	1093 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	ZC3H10	Q96K80	434 aa	Known RBP	4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	HERPUD2	Q9BSE4	406 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	PTDSS2	Q9BVG9	487 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	COLEC11	Q9BWP8	271 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	ZNF341	Q9BYN7	854 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	MAGEB5	Q9BZ81	275 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	HEYL	Q9NQ87	328 aa	Predicted RBP	4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	TFCP2L1	Q9NZI6	479 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	KIAA1551	Q9HCM1	1747 aa		4.62	□□□□□ -1.67
LRRC28-222	ENST00000561431	ABHD14A-ACY1	A0A1B0GW23	586 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431		A0A1W2PPC4	97 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	hCG_1984214	I3L0E3	225 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	DCLK1	O15075	740 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	RNMT	O43148	476 aa	Known RBP	4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	PRKAR1B	P31321	381 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	PRKAR2B	P31323	418 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	PTGS2	P35354	604 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	TDO2	P48775	406 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	PPM1F	P49593	454 aa	Predicted RBP	4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	CPT1A	P50416	773 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	EIF5	P55010	431 aa	Known RBP	4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	TNFAIP2	Q03169	654 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	TCF15	Q12870	199 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	HLX	Q14774	488 aa	Predicted RBP	4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	CYP2A13	Q16696	494 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	SLC4A8	Q2Y0W8	1093 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	BEAN1	Q3B7T3	259 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	DGKK	Q5KSL6	1271 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	IGFL4	Q6B9Z1	124 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	PGBD2	Q6P3X8	592 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	KCNV1	Q6PIU1	500 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	ZNF280B	Q86YH2	543 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	SLC15A3	Q8IY34	581 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	CHCHD4	Q8N4Q1	142 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	FANCB	Q8NB91	859 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	TOR1AIP2	Q8NFQ8	470 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	IL17RE	Q8NFR9	667 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	BPIFB1	Q8TDL5	484 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	ANP32B	Q92688	251 aa	Known RBP	4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	HAS1	Q92839	578 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	MPP4	Q96JB8	637 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	CDHR1	Q96JP9	859 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	CFAP53	Q96M91	514 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	NELL2	Q99435	816 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	CRB3	Q9BUF7	120 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	INTS13	Q9NVM9	706 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	VSX1	Q9NZR4	365 aa	Predicted RBP	4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	CEP72	Q9P209	647 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	MYO1A	Q9UBC5	1043 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	SERTAD3	Q9UJW9	196 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	MAN2B2	Q9Y2E5	1009 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	MRPS17	Q9Y2R5	130 aa	Known RBP	4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	WDR33	Q9C0J8	1336 aa	Known RBP	4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	SCN7A	Q01118	1682 aa		4.61	□□□□□ -1.67
LRRC28-222	ENST00000561431	KDM3B	Q7LBC6	1761 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	MYH14	Q7Z406	1995 aa	Known RBP	4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	AQP7P3	A6NL99	342 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	FIBP	O43427	364 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	SRGAP2	O75044	1071 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	PIAS2	O75928	621 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	IGHD	P01880	384 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	C1S	P09871	688 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	ITGAM	P11215	1152 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	IL1R1	P14778	569 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	BTF3	P20290	206 aa	Known RBP	4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	YY1	P25490	414 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	EEF1G	P26641	437 aa	Known RBP	4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	HSPA7	P48741	367 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	TOB1	P50616	345 aa	Predicted RBP	4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	VAV2	P52735	878 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	WASHC5	Q12768	1159 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	DDX10	Q13206	875 aa	Known RBP	4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	TUBA3C	Q13748	450 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	PUM3	Q15397	648 aa	Known RBP	4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	ELF2	Q15723	593 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	PDCD2	Q16342	344 aa	Predicted RBP	4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	WDR45B	Q5MNZ6	344 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	CFAP161	Q6P656	301 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	TUBA3E	Q6PEY2	450 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	MMS22L	Q6ZRQ5	1243 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	LRRC55	Q6ZSA7	311 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	GAS2L3	Q86XJ1	694 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	ZNF354C	Q86Y25	554 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	ANKRD42	Q8N9B4	389 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	ZNF527	Q8NB42	609 aa		4.6	□□□□□ -1.67
LRRC28-222	ENST00000561431	TRIM63	Q969Q1	353 aa		4.6	□□□□□ -1.67

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