RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 STK32AQ8WU08 396 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 C18orf8Q96DM3 657 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 ERGIC2Q96RQ1 377 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 IRF2BPLQ9H1B7 796 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 KCNH6Q9H252 994 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 LHX5Q9H2C1 402 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 POPDC2Q9HBU9 364 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 DDIT4Q9NX09 232 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 IFNKQ9P0W0 207 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 WDR35Q9P2L0 1181 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 ZNF510Q9Y2H8 683 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 HBS1LQ9Y450 684 aaKnown RBP10.55□□□□□ -0.72
HERC1-212ENST00000561348 CACNA1IQ9P0X4 2223 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 MUC6Q6W4X9 2439 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 TMCO5BA8MYB1 307 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.54□□□□□ -0.72
HERC1-212ENST00000561348 ATG13O75143 517 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 TRUB2O95900 331 aaKnown RBP10.54□□□□□ -0.72
HERC1-212ENST00000561348 APOEP02649 317 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 FYNP06241 537 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 TNFAIP3P21580 790 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 HOXC13P31276 330 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 GBP1P32455 592 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 SLC11A2P49281 568 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 DGKGP49619 791 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 NUMBP49757 651 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 JAM2P57087 298 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 PITX1P78337 314 aaPredicted RBP10.54□□□□□ -0.72
HERC1-212ENST00000561348 SLC6A3Q01959 620 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 MESP2Q0VG99 397 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 TRIP4Q15650 581 aaPredicted RBP10.54□□□□□ -0.72
HERC1-212ENST00000561348 ASIC2Q16515 512 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 ZC3H12AQ5D1E8 599 aaKnown RBP10.54□□□□□ -0.72
HERC1-212ENST00000561348 RFWD3Q6PCD5 774 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 MMS22LQ6ZRQ5 1243 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 NUDT18Q6ZVK8 323 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 TAC4Q86UU9 113 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 ALYREFQ86V81 257 aaKnown RBP10.54□□□□□ -0.72
HERC1-212ENST00000561348 UNC45BQ8IWX7 931 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 ZNF687Q8N1G0 1237 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 PGBD3Q8N328 593 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 SPEM1Q8N4L4 309 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 ZNF276Q8N554 614 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 ATRIPQ8WXE1 791 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 TMA16Q96EY4 203 aaKnown RBP10.54□□□□□ -0.72
HERC1-212ENST00000561348 SERPINB11Q96P15 392 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 HHIPQ96QV1 700 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 HINFPQ9BQA5 517 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 C11orf70Q9BRQ4 267 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 TRIM62Q9BVG3 475 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 C2orf42Q9NWW7 574 aa10.54□□□□□ -0.72
HERC1-212ENST00000561348 A0A1B0GTH6 734 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 LRRC53A6NM62 1247 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 CHURC1-FNTBB4DL54 471 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 M0QYT0 321 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 GREM1O60565 184 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 HSF2BPO75031 334 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 KLF8O95600 359 aaPredicted RBP10.53□□□□□ -0.72
HERC1-212ENST00000561348 CAVIN2O95810 425 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 CCDC172P0C7W6 258 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 FERP16591 822 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 GRIA2P42262 883 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 NSFP46459 744 aaKnown RBP10.53□□□□□ -0.72
HERC1-212ENST00000561348 FNTBP49356 437 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 SULT1E1P49888 294 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 CDR2Q01850 454 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 LPAL2Q16609 132 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 MEA1Q16626 185 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 GAB4Q2WGN9 574 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 FBXO43Q4G163 708 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 NUGGCQ68CJ6 796 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 MSANTD2Q6P1R3 559 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 Q6ZNB5 142 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 PRR23BQ6ZRT6 265 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 CCDC117Q8IWD4 279 aaPredicted RBP10.53□□□□□ -0.72
HERC1-212ENST00000561348 CFAP52Q8N1V2 620 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 SCML4Q8N228 414 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 SYNPOQ8N3V7 929 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 ALLCQ8N6M5 410 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 DDX1Q92499 740 aaKnown RBP10.53□□□□□ -0.72
HERC1-212ENST00000561348 SLC12A6Q9UHW9 1150 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 WDFY4Q6ZS81 3184 aa10.53□□□□□ -0.72
HERC1-212ENST00000561348 TYW5A2RUC4 315 aaKnown RBP10.52□□□□□ -0.73
HERC1-212ENST00000561348 K7EQS6 105 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 HOXC11O43248 304 aaPredicted RBP10.52□□□□□ -0.73
HERC1-212ENST00000561348 ACSL4O60488 711 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 TBL1XO60907 577 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 GJB6O95452 261 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 LSM8O95777 96 aaKnown RBP10.52□□□□□ -0.73
HERC1-212ENST00000561348 TPM3P06753 285 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 CHRM1P11229 460 aaPredicted RBP10.52□□□□□ -0.73
HERC1-212ENST00000561348 SKILP12757 684 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 CHRNB2P17787 502 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 ABCB4P21439 1286 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 GGCXP38435 758 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 PLA2G5P39877 138 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 NOMO3P69849 1222 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 FMO1Q01740 532 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 DMWDQ09019 674 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 DMC1Q14565 340 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms