RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 MLF2Q15773 248 aaPredicted RBP10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 SLC18A3Q16572 532 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 IER5LQ5T953 404 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 TRNP1Q6NT89 227 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 ALKBH5Q6P6C2 394 aaKnown RBP10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 RHBDF2Q6PJF5 856 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 TAC4Q86UU9 113 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 BBS7Q8IWZ6 715 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 CPA6Q8N4T0 437 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 CSGALNACT1Q8TDX6 532 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 NUP205Q92621 2012 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 CENPIQ92674 756 aaPredicted RBP10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 TRIM11Q96F44 468 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 SHDQ96IW2 340 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 NELL2Q99435 816 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 CHP1Q99653 195 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 OSBPL6Q9BZF3 934 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 EBF3Q9H4W6 596 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 ARHGEF3Q9NR81 526 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 HEBP1Q9NRV9 189 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 MARK1Q9P0L2 795 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 STAP1Q9ULZ2 295 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 WNT6Q9Y6F9 365 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 TMEM221A6NGB7 291 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 KCNU1A8MYU2 1149 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 GOLGA8SH3BPF8 625 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 M0R296 226 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 MAN2B1O00754 1011 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 HOXC11O43248 304 aaPredicted RBP10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 MSI1O43347 362 aaKnown RBP10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 GRAP2O75791 330 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 LCA5LO95447 670 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 SLC2A3P11169 496 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 ARSAP15289 507 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 COL9A1P20849 921 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 RRM1P23921 792 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 CORO1AP31146 461 aaKnown RBP10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 CTHP32929 405 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 RFC1P35251 1148 aaPredicted RBP10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 EIF2DP41214 584 aaKnown RBP10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 PTPN9P43378 593 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 CXCR3P49682 368 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 PITX1P78337 314 aaPredicted RBP10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 AMPD2Q01433 879 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 TNK2Q07912 1038 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 PPP2R5DQ14738 602 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 DHCR24Q15392 516 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 GAB4Q2WGN9 574 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 ADGRF1Q5T601 910 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 OTUD1Q5VV17 481 aaPredicted RBP10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 TRIM68Q6AZZ1 485 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 ZNF687Q8N1G0 1237 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 CHFRQ96EP1 664 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 SELENOOQ9BVL4 669 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 ADAM33Q9BZ11 813 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 SPHK2Q9NRA0 654 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 METTL5Q9NRN9 209 aaKnown RBP10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 PARVAQ9NVD7 372 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 FBXL21Q9UKT6 434 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 AGO1Q9UL18 857 aaKnown RBP10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 CACNA1IQ9P0X4 2223 aa10.02□□□□□ -0.81
RABGGTA-221ENST00000561055 ZDBF2Q9HCK1 2354 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 FANCMQ8IYD8 2048 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 A0A0A0MRY4 1105 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 KANSL1LA0AUZ9 987 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 ANKRD62A6NC57 917 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 TMEM191CA6NGB0 347 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 SPECC1L-ADORA2AF8WAN1 911 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 M0QYT0 321 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 TRDMT1O14717 391 aaKnown RBP10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 ACSL4O60488 711 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 CYP17A1P05093 508 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 IRF1P10914 325 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 PDGFRAP16234 1089 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 CCR1P32246 355 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 GJA4P35212 333 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 SLC11A2P49281 568 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 CLCN5P51795 746 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 RNASE9P60153 205 aaKnown RBP10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 GAD2Q05329 585 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 MAMLD1Q13495 774 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 CCDC14Q49A88 953 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 BRMS1LQ5PSV4 323 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 MPP7Q5T2T1 576 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 ACBD5Q5T8D3 534 aaPredicted RBP10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 RNF43Q68DV7 783 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 ZNF852Q6ZMS4 543 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 STRADAQ7RTN6 431 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 DENND1CQ8IV53 801 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 CCDC170Q8IYT3 715 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 SIX5Q8N196 739 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 JOSD2Q8TAC2 188 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 FNIP1Q8TF40 1166 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 RXFP2Q8WXD0 754 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 BTN2A3PQ96KV6 586 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 CCDC42Q96M95 316 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 TBCBQ99426 244 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 C1QTNF1Q9BXJ1 281 aa10.01□□□□□ -0.81
RABGGTA-221ENST00000561055 NHEJ1Q9H9Q4 299 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms