RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 NTAN1Q96AB6 310 aa23.18■■□□□ 1.3
SNX22-205ENST00000560945 CSPG4P5Q96PW8 444 aa23.18■■□□□ 1.3
SNX22-205ENST00000560945 GDF15Q99988 308 aa23.18■■□□□ 1.3
SNX22-205ENST00000560945 C10orf88Q9H8K7 445 aa23.18■■□□□ 1.3
SNX22-205ENST00000560945 ZNF334Q9HCZ1 680 aaPredicted RBP23.18■■□□□ 1.3
SNX22-205ENST00000560945 EFR3BQ9Y2G0 817 aa23.18■■□□□ 1.3
SNX22-205ENST00000560945 RWDD3Q9Y3V2 267 aa23.18■■□□□ 1.3
SNX22-205ENST00000560945 ZNF638Q14966 1978 aaKnown RBP23.18■■□□□ 1.3
SNX22-205ENST00000560945 CSH1P0DML2 217 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 CSH2P0DML3 217 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 DR1Q01658 176 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 OTUD4Q01804 1114 aaKnown RBP23.17■■□□□ 1.3
SNX22-205ENST00000560945 GUCY2DQ02846 1103 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 GLE1Q53GS7 698 aaKnown RBP23.17■■□□□ 1.3
SNX22-205ENST00000560945 SND1Q7KZF4 910 aaKnown RBP eCLIP23.17■■□□□ 1.3
SNX22-205ENST00000560945 MICAL1Q8TDZ2 1067 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 RNF34Q969K3 372 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 FAF2Q96CS3 445 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 ZNF670Q9BS34 389 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 ETNK2Q9NVF9 386 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 CLIC5Q9NZA1 410 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 STIM2Q9P246 746 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 XPO7Q9UIA9 1087 aaKnown RBP23.17■■□□□ 1.3
SNX22-205ENST00000560945 DNPEPQ9ULA0 475 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 IRAK3Q9Y616 596 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 TARSL2A2RTX5 802 aaKnown RBP23.17■■□□□ 1.3
SNX22-205ENST00000560945 LIASO43766 372 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 CREB3O43889 395 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 ADH1AP07327 375 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 MYBL2P10244 700 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 GBP1P32455 592 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 CCNG2Q16589 344 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 EFHC2Q5JST6 749 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 C10orf120Q5SQS8 335 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 CCDC70Q6NSX1 233 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 C1orf228Q6PIY5 440 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 B4GALNT4Q76KP1 1039 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 JAMLQ86YT9 394 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 CCDC105Q8IYK2 499 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 PLD5Q8N7P1 536 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 ACTL9Q8TC94 416 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 ZNF512Q96ME7 567 aaPredicted RBP23.17■■□□□ 1.3
SNX22-205ENST00000560945 EPB41L5Q9HCM4 733 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 PCYOX1Q9UHG3 505 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 RASAL2Q9UJF2 1139 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 RAB21Q9UL25 225 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 PCDHA11Q9Y5I1 949 aa23.17■■□□□ 1.3
SNX22-205ENST00000560945 CHD9Q3L8U1 2897 aa23.16■■□□□ 1.3
SNX22-205ENST00000560945 MAP3K6O95382 1288 aa23.16■■□□□ 1.3
SNX22-205ENST00000560945 AMPD1P23109 780 aa23.16■■□□□ 1.3
SNX22-205ENST00000560945 SCAPQ12770 1279 aa23.16■■□□□ 1.3
SNX22-205ENST00000560945 DNAJB7Q7Z6W7 309 aaPredicted RBP23.16■■□□□ 1.3
SNX22-205ENST00000560945 PRUNE1Q86TP1 453 aa23.16■■□□□ 1.3
SNX22-205ENST00000560945 MIB1Q86YT6 1006 aa23.16■■□□□ 1.3
SNX22-205ENST00000560945 CCDC26Q8TAB7 109 aa23.16■■□□□ 1.3
SNX22-205ENST00000560945 CEP295NLQ96MC4 621 aa23.16■■□□□ 1.3
SNX22-205ENST00000560945 TGS1Q96RS0 853 aaKnown RBP23.16■■□□□ 1.3
SNX22-205ENST00000560945 EMILIN2Q9BXX0 1053 aa23.16■■□□□ 1.3
SNX22-205ENST00000560945 MAK16Q9BXY0 300 aaKnown RBP23.16■■□□□ 1.3
SNX22-205ENST00000560945 PBX4Q9BYU1 374 aa23.16■■□□□ 1.3
SNX22-205ENST00000560945 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.16■■□□□ 1.3
SNX22-205ENST00000560945 CHD7Q9P2D1 2997 aa23.16■■□□□ 1.3
SNX22-205ENST00000560945 FNTAP49354 379 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 VEPH1Q14D04 833 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 FAM182AQ5T1J6 154 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 DDX42Q86XP3 938 aaKnown RBP eCLIP23.15■■□□□ 1.3
SNX22-205ENST00000560945 PSTKQ8IV42 348 aaKnown RBP23.15■■□□□ 1.3
SNX22-205ENST00000560945 NETO2Q8NC67 525 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 KREMEN2Q8NCW0 462 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 CASKIN2Q8WXE0 1202 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 MYRFLQ96LU7 910 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 NKX2-4Q9H2Z4 354 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 ARHGEF38Q9NXL2 777 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 ZNF840PA6NDX5 716 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 TLR5O60602 858 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 MOCS2O96007 188 aaPredicted RBP23.15■■□□□ 1.3
SNX22-205ENST00000560945 HMBSP08397 361 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 H2AFXP16104 143 aaPredicted RBP23.15■■□□□ 1.3
SNX22-205ENST00000560945 PSEN1P49768 467 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 EPHB3P54753 998 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 SEMA3BQ13214 749 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 TAF12Q16514 161 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 SLC9A4Q6AI14 798 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.15■■□□□ 1.3
SNX22-205ENST00000560945 LRRN4Q8WUT4 740 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 PSMG2Q969U7 264 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 FCRL2Q96LA5 508 aaPredicted RBP23.15■■□□□ 1.3
SNX22-205ENST00000560945 SERPINB11Q96P15 392 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 TRIM31Q9BZY9 425 aa23.15■■□□□ 1.3
SNX22-205ENST00000560945 BHMG1C9JSJ3 638 aaPredicted RBP23.14■■□□□ 1.29
SNX22-205ENST00000560945 APOL1O14791 398 aa23.14■■□□□ 1.29
SNX22-205ENST00000560945 RB1P06400 928 aa23.14■■□□□ 1.29
SNX22-205ENST00000560945 C8AP07357 584 aa23.14■■□□□ 1.29
SNX22-205ENST00000560945 ERVK-21P61565 698 aa23.14■■□□□ 1.29
SNX22-205ENST00000560945 UBE3AQ05086 875 aa23.14■■□□□ 1.29
SNX22-205ENST00000560945 ARL13BQ3SXY8 428 aa23.14■■□□□ 1.29
SNX22-205ENST00000560945 WDR93Q6P2C0 686 aa23.14■■□□□ 1.29
SNX22-205ENST00000560945 TMEM150AQ86TG1 271 aa23.14■■□□□ 1.29
SNX22-205ENST00000560945 CCDC33Q8N5R6 958 aa23.14■■□□□ 1.29
SNX22-205ENST00000560945 SLC22A17Q8WUG5 538 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms