RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 ADH5P11766 374 aa21.6■■□□□ 1.05
PSEN1-225ENST00000560005 TNFRSF4P43489 277 aa21.6■■□□□ 1.05
PSEN1-225ENST00000560005 PSMC1P62191 440 aaKnown RBP21.6■■□□□ 1.05
PSEN1-225ENST00000560005 TRIP6Q15654 476 aaKnown RBP21.6■■□□□ 1.05
PSEN1-225ENST00000560005 SLC36A4Q6YBV0 504 aa21.6■■□□□ 1.05
PSEN1-225ENST00000560005 RABEPKQ7Z6M1 372 aa21.6■■□□□ 1.05
PSEN1-225ENST00000560005 BRSK2Q8IWQ3 736 aa21.6■■□□□ 1.05
PSEN1-225ENST00000560005 KIAA1958Q8N8K9 716 aa21.6■■□□□ 1.05
PSEN1-225ENST00000560005 CXorf38Q8TB03 319 aa21.6■■□□□ 1.05
PSEN1-225ENST00000560005 CCDC127Q96BQ5 260 aa21.6■■□□□ 1.05
PSEN1-225ENST00000560005 CFAP97Q9P2B7 532 aa21.6■■□□□ 1.05
PSEN1-225ENST00000560005 PYCARDQ9ULZ3 195 aa21.6■■□□□ 1.05
PSEN1-225ENST00000560005 COQ4Q9Y3A0 265 aa21.6■■□□□ 1.05
PSEN1-225ENST00000560005 ZNF840PA6NDX5 716 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.59■■□□□ 1.05
PSEN1-225ENST00000560005 SH3BP5O60239 455 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 ABL1P00519 1130 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 CCDC172P0C7W6 258 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 UCHL3P15374 230 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 GABRG2P18507 467 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 SLC9A1P19634 815 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 BDNFP23560 247 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 GRIK1P39086 918 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 GCLMP48507 274 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 POLR2FP61218 127 aaKnown RBP21.59■■□□□ 1.05
PSEN1-225ENST00000560005 MEA1Q16626 185 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 SOWAHAQ2M3V2 549 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 SFMBT2Q5VUG0 894 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 SMYD5Q6GMV2 418 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 TRIM65Q6PJ69 517 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 VSTM1Q6UX27 236 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 RRAGAQ7L523 313 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 TMEM139Q8IV31 216 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 CCDC170Q8IYT3 715 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 PNPLA1Q8N8W4 532 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 ZSWIM2Q8NEG5 633 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 ADAMTS14Q8WXS8 1223 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 SPAG5Q96R06 1193 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 SYT15Q9BQS2 421 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 GANQ9H2C0 597 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 CCDC86Q9H6F5 360 aaKnown RBP21.59■■□□□ 1.05
PSEN1-225ENST00000560005 DNAAF2Q9NVR5 837 aaKnown RBP21.59■■□□□ 1.05
PSEN1-225ENST00000560005 CALCOCO1Q9P1Z2 691 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 ITGA11Q9UKX5 1188 aa21.59■■□□□ 1.05
PSEN1-225ENST00000560005 LRRIQ3A6PVS8 624 aaPredicted RBP21.58■■□□□ 1.05
PSEN1-225ENST00000560005 OLFM2O95897 454 aa21.58■■□□□ 1.05
PSEN1-225ENST00000560005 SYPP08247 313 aa21.58■■□□□ 1.05
PSEN1-225ENST00000560005 FTH1P19P0C7X4 201 aa21.58■■□□□ 1.05
PSEN1-225ENST00000560005 TNNI1P19237 187 aa21.58■■□□□ 1.05
PSEN1-225ENST00000560005 DLG4P78352 724 aa21.58■■□□□ 1.05
PSEN1-225ENST00000560005 PPP3CAQ08209 521 aa21.58■■□□□ 1.05
PSEN1-225ENST00000560005 GOLGA8FQ08AF8 430 aa21.58■■□□□ 1.05
PSEN1-225ENST00000560005 GOLGA8DPQ0D2H9 430 aa21.58■■□□□ 1.05
PSEN1-225ENST00000560005 CBWD6Q4V339 395 aa21.58■■□□□ 1.05
PSEN1-225ENST00000560005 CBWD3Q5JTY5 395 aa21.58■■□□□ 1.05
PSEN1-225ENST00000560005 CBWD5Q5RIA9 395 aa21.58■■□□□ 1.05
PSEN1-225ENST00000560005 C1orf220Q5T0J3 134 aa21.58■■□□□ 1.05
PSEN1-225ENST00000560005 PHTF2Q8N3S3 785 aa21.58■■□□□ 1.05
PSEN1-225ENST00000560005 FBXL13Q8NEE6 735 aa21.58■■□□□ 1.05
PSEN1-225ENST00000560005 CGRRF1Q99675 332 aa21.58■■□□□ 1.05
PSEN1-225ENST00000560005 TTLL2Q9BWV7 592 aa21.58■■□□□ 1.05
PSEN1-225ENST00000560005 INTS2Q9H0H0 1204 aaKnown RBP21.58■■□□□ 1.05
PSEN1-225ENST00000560005 CRTAC1Q9NQ79 661 aa21.58■■□□□ 1.05
PSEN1-225ENST00000560005 SIX4Q9UIU6 781 aa21.58■■□□□ 1.05
PSEN1-225ENST00000560005 PCDHB9Q9Y5E1 797 aa21.58■■□□□ 1.05
PSEN1-225ENST00000560005 BZW2Q9Y6E2 419 aaKnown RBP21.58■■□□□ 1.05
PSEN1-225ENST00000560005 HELZ2Q9BYK8 2649 aaKnown RBP21.58■■□□□ 1.04
PSEN1-225ENST00000560005 TBC1D3BA6NDS4 549 aa21.57■■□□□ 1.04
PSEN1-225ENST00000560005 GOLGA6L9A6NEM1 432 aa21.57■■□□□ 1.04
PSEN1-225ENST00000560005 RNF225M0QZC1 329 aaPredicted RBP21.57■■□□□ 1.04
PSEN1-225ENST00000560005 DLATP10515 647 aaKnown RBP21.57■■□□□ 1.04
PSEN1-225ENST00000560005 LMO2P25791 158 aa21.57■■□□□ 1.04
PSEN1-225ENST00000560005 ANXA13P27216 316 aa21.57■■□□□ 1.04
PSEN1-225ENST00000560005 CYLC1P35663 651 aaPredicted RBP21.57■■□□□ 1.04
PSEN1-225ENST00000560005 RBP5P82980 135 aa21.57■■□□□ 1.04
PSEN1-225ENST00000560005 CYP27A1Q02318 531 aa21.57■■□□□ 1.04
PSEN1-225ENST00000560005 LY6G5CQ5SRR4 150 aa21.57■■□□□ 1.04
PSEN1-225ENST00000560005 CCNI2Q6ZMN8 369 aaPredicted RBP21.57■■□□□ 1.04
PSEN1-225ENST00000560005 SLC41A1Q8IVJ1 513 aa21.57■■□□□ 1.04
PSEN1-225ENST00000560005 ZNF513Q8N8E2 541 aaPredicted RBP21.57■■□□□ 1.04
PSEN1-225ENST00000560005 BAP1Q92560 729 aa21.57■■□□□ 1.04
PSEN1-225ENST00000560005 CEP295NLQ96MC4 621 aa21.57■■□□□ 1.04
PSEN1-225ENST00000560005 EHD2Q9NZN4 543 aa21.57■■□□□ 1.04
PSEN1-225ENST00000560005 AIPL1Q9NZN9 384 aa21.57■■□□□ 1.04
PSEN1-225ENST00000560005 APEX2Q9UBZ4 518 aa21.57■■□□□ 1.04
PSEN1-225ENST00000560005 IGHV1OR15-9A0A0B4J2B8 117 aa21.56■■□□□ 1.04
PSEN1-225ENST00000560005 IPO7O95373 1038 aaKnown RBP21.56■■□□□ 1.04
PSEN1-225ENST00000560005 OAS1P00973 400 aaKnown RBP21.56■■□□□ 1.04
PSEN1-225ENST00000560005 HOXB2P14652 356 aa21.56■■□□□ 1.04
PSEN1-225ENST00000560005 PPP3CCP48454 512 aa21.56■■□□□ 1.04
PSEN1-225ENST00000560005 TRMT11Q7Z4G4 463 aaKnown RBP21.56■■□□□ 1.04
PSEN1-225ENST00000560005 WDR49Q8IV35 697 aa21.56■■□□□ 1.04
PSEN1-225ENST00000560005 NAT16Q8N8M0 369 aa21.56■■□□□ 1.04
PSEN1-225ENST00000560005 MDM1Q8TC05 714 aa21.56■■□□□ 1.04
PSEN1-225ENST00000560005 PLEKHO2Q8TD55 490 aa21.56■■□□□ 1.04
PSEN1-225ENST00000560005 HNRNPLLQ8WVV9 542 aaKnown RBP21.56■■□□□ 1.04
PSEN1-225ENST00000560005 KBTBD7Q8WVZ9 684 aa21.56■■□□□ 1.04
PSEN1-225ENST00000560005 HSPA12BQ96MM6 686 aa21.56■■□□□ 1.04
PSEN1-225ENST00000560005 STK33Q9BYT3 514 aa21.56■■□□□ 1.04
PSEN1-225ENST00000560005 MTMR12Q9C0I1 747 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms