RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 HSCBQ8IWL3 235 aa9.62□□□□□ -0.87
HDDC3-204ENST00000559834 FAM186BQ8IYM0 893 aa9.62□□□□□ -0.87
HDDC3-204ENST00000559834 CPXM2Q8N436 756 aa9.62□□□□□ -0.87
HDDC3-204ENST00000559834 SPRYD3Q8NCJ5 442 aa9.62□□□□□ -0.87
HDDC3-204ENST00000559834 OR2I1PQ8NGU4 316 aa9.62□□□□□ -0.87
HDDC3-204ENST00000559834 TAS1R2Q8TE23 839 aa9.62□□□□□ -0.87
HDDC3-204ENST00000559834 DDI1Q8WTU0 396 aa9.62□□□□□ -0.87
HDDC3-204ENST00000559834 GPR174Q9BXC1 333 aa9.62□□□□□ -0.87
HDDC3-204ENST00000559834 MIR1-1HGQ9H1L0 117 aa9.62□□□□□ -0.87
HDDC3-204ENST00000559834 SLC6A17Q9H1V8 727 aa9.62□□□□□ -0.87
HDDC3-204ENST00000559834 APOBEC3GQ9HC16 384 aaKnown RBP9.62□□□□□ -0.87
HDDC3-204ENST00000559834 TMEM8AQ9HCN3 771 aa9.62□□□□□ -0.87
HDDC3-204ENST00000559834 ELOVL2Q9NXB9 296 aa9.62□□□□□ -0.87
HDDC3-204ENST00000559834 MARCH2Q9P0N8 246 aa9.62□□□□□ -0.87
HDDC3-204ENST00000559834 USP36Q9P275 1121 aaKnown RBP9.62□□□□□ -0.87
HDDC3-204ENST00000559834 RALYQ9UKM9 306 aaKnown RBP9.62□□□□□ -0.87
HDDC3-204ENST00000559834 APOBEC2Q9Y235 224 aaKnown RBP9.62□□□□□ -0.87
HDDC3-204ENST00000559834 MYH10P35580 1976 aa9.62□□□□□ -0.87
HDDC3-204ENST00000559834 CACNA1EQ15878 2313 aa9.62□□□□□ -0.87
HDDC3-204ENST00000559834 A0A1B0GVL5 298 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 SLC12A8A0AV02 714 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 BCAT2O15382 392 aaPredicted RBP9.61□□□□□ -0.87
HDDC3-204ENST00000559834 GJB3O75712 270 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 RHOBTB3O94955 611 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 CER1O95813 267 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 HMBSP08397 361 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 PFKFB1P16118 471 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 IL12RB1P42701 662 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 SYKP43405 635 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 HARS2P49590 506 aaKnown RBP9.61□□□□□ -0.87
HDDC3-204ENST00000559834 TPMTP51580 245 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 ZNF445P59923 1031 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 YWHAGP61981 247 aaKnown RBP eCLIP9.61□□□□□ -0.87
HDDC3-204ENST00000559834 FAM193AP78312 1265 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 GEN1Q17RS7 908 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 MPPE1Q53F39 396 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 ZNF394Q53GI3 561 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 ANKS1BQ7Z6G8 1248 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 DENND1CQ8IV53 801 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 NAXDQ8IW45 347 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 ANKRD52Q8NB46 1076 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 SETD7Q8WTS6 366 aaKnown RBP9.61□□□□□ -0.87
HDDC3-204ENST00000559834 ADAMTS14Q8WXS8 1223 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 CCDC34Q96HJ3 373 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 TMEM176AQ96HP8 235 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 CIPCQ9C0C6 399 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 MKRN2Q9H000 416 aaKnown RBP9.61□□□□□ -0.87
HDDC3-204ENST00000559834 PCED1AQ9H1Q7 454 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 MMRN2Q9H8L6 949 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 OLA1Q9NTK5 396 aaKnown RBP9.61□□□□□ -0.87
HDDC3-204ENST00000559834 AGO1Q9UL18 857 aaKnown RBP9.61□□□□□ -0.87
HDDC3-204ENST00000559834 PLA2G4CQ9UP65 541 aa9.61□□□□□ -0.87
HDDC3-204ENST00000559834 CEP192Q8TEP8 1941 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 FAM208BQ5VWN6 2430 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 ZBED1O96006 694 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 IGLV3-19P01714 112 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 EPHX1P07099 455 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 ZNF883P0CG24 379 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 TRIM49P0CI25 452 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 TRIM49CP0CI26 452 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 MATKP42679 507 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 TKTL1P51854 596 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 RING1Q06587 406 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 PDE4CQ08493 712 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 GRIK2Q13002 908 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 ZNF234Q14588 700 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 SUZ12Q15022 739 aaKnown RBP9.6□□□□□ -0.87
HDDC3-204ENST00000559834 DCAF12L1Q5VU92 463 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 ARHGAP17Q68EM7 881 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 PM20D1Q6GTS8 502 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 SERPINA13PQ6UXR4 307 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 GLRX5Q86SX6 157 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 PIGZQ86VD9 579 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 GUF1Q8N442 669 aaKnown RBP9.6□□□□□ -0.87
HDDC3-204ENST00000559834 FBXL13Q8NEE6 735 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 RNF139Q8WU17 664 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 PLD4Q96BZ4 506 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 TMA16Q96EY4 203 aaKnown RBP9.6□□□□□ -0.87
HDDC3-204ENST00000559834 PIWIL1Q96J94 861 aaKnown RBP9.6□□□□□ -0.87
HDDC3-204ENST00000559834 SPATA32Q96LK8 384 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 CAMK1GQ96NX5 476 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 GAREM1Q9H706 876 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 LRRC4Q9HBW1 653 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 CD93Q9NPY3 652 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 CISHQ9NSE2 258 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 RAB20Q9NX57 234 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 KIAA1522Q9P206 1035 aaPredicted RBP9.6□□□□□ -0.87
HDDC3-204ENST00000559834 LHX6Q9UPM6 363 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 MAPK8IP1Q9UQF2 711 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 HPSEQ9Y251 543 aa9.6□□□□□ -0.87
HDDC3-204ENST00000559834 TNRC6BQ9UPQ9 1833 aaKnown RBP9.6□□□□□ -0.87
HDDC3-204ENST00000559834 KCNJ18B7U540 433 aa9.59□□□□□ -0.87
HDDC3-204ENST00000559834 CETN3O15182 167 aa9.59□□□□□ -0.87
HDDC3-204ENST00000559834 FTH1P19P0C7X4 201 aa9.59□□□□□ -0.87
HDDC3-204ENST00000559834 EPB41P11171 864 aaKnown RBP9.59□□□□□ -0.87
HDDC3-204ENST00000559834 RAD23BP54727 409 aa9.59□□□□□ -0.87
HDDC3-204ENST00000559834 MCCD1P59942 119 aaPredicted RBP9.59□□□□□ -0.87
HDDC3-204ENST00000559834 YWHAEP62258 255 aaKnown RBP9.59□□□□□ -0.87
HDDC3-204ENST00000559834 KRT85P78386 507 aa9.59□□□□□ -0.87
HDDC3-204ENST00000559834 SCAPQ12770 1279 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms