RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 RNASEH2BQ5TBB1 312 aaKnown RBP13.15□□□□□ -0.3
USP3-213ENST00000559711 NCBP2-AS2Q69YL0 99 aa13.15□□□□□ -0.3
USP3-213ENST00000559711 TRMT10CQ7L0Y3 403 aaKnown RBP13.15□□□□□ -0.3
USP3-213ENST00000559711 PCGF5Q86SE9 256 aa13.15□□□□□ -0.3
USP3-213ENST00000559711 TAC4Q86UU9 113 aa13.15□□□□□ -0.3
USP3-213ENST00000559711 ZC3H18Q86VM9 953 aaKnown RBP13.15□□□□□ -0.3
USP3-213ENST00000559711 MON1AQ86VX9 555 aa13.15□□□□□ -0.3
USP3-213ENST00000559711 ZCCHC9Q8N567 271 aaKnown RBP13.15□□□□□ -0.3
USP3-213ENST00000559711 IGSF21Q96ID5 467 aa13.15□□□□□ -0.3
USP3-213ENST00000559711 WDCPQ9H6R7 721 aa13.15□□□□□ -0.3
USP3-213ENST00000559711 FAM204AQ9H8W3 233 aa13.15□□□□□ -0.3
USP3-213ENST00000559711 RC3H2Q9HBD1 1191 aaKnown RBP13.15□□□□□ -0.3
USP3-213ENST00000559711 ANLNQ9NQW6 1124 aa13.15□□□□□ -0.3
USP3-213ENST00000559711 ARHGEF4Q9NR80 690 aa13.15□□□□□ -0.3
USP3-213ENST00000559711 TMPRSS4Q9NRS4 437 aa13.15□□□□□ -0.3
USP3-213ENST00000559711 HEY1Q9Y5J3 304 aa13.15□□□□□ -0.3
USP3-213ENST00000559711 SCN5AQ14524 2016 aa13.15□□□□□ -0.3
USP3-213ENST00000559711 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.15□□□□□ -0.31
USP3-213ENST00000559711 POLR3GO15318 223 aaPredicted RBP13.15□□□□□ -0.31
USP3-213ENST00000559711 VNN2O95498 520 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 AMHP03971 560 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 CPB1P15086 417 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 CSF2RAP15509 400 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 PGFP49763 221 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 EIF3BP55884 814 aaKnown RBP13.15□□□□□ -0.31
USP3-213ENST00000559711 GBE1Q04446 702 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 DPYSQ14117 519 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 BTBD8Q5XKL5 378 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 SLC8B1Q6J4K2 584 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 MFSD5Q6N075 450 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 CEP128Q6ZU80 1094 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 BZW1Q7L1Q6 419 aaKnown RBP13.15□□□□□ -0.31
USP3-213ENST00000559711 GOLGA6L1Q8N7Z2 621 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 SPATA17Q96L03 361 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 PGLYRP2Q96PD5 576 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 VN1R3Q9BXE9 311 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 SMOC2Q9H3U7 446 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 ETNK2Q9NVF9 386 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 COMMD8Q9NX08 183 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 DTLQ9NZJ0 730 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 MTRRQ9UBK8 725 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 SHOC2Q9UQ13 582 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 FARP1Q9Y4F1 1045 aaPredicted RBP13.15□□□□□ -0.31
USP3-213ENST00000559711 BACE2Q9Y5Z0 518 aa13.15□□□□□ -0.31
USP3-213ENST00000559711 SMAPO00193 183 aa13.14□□□□□ -0.31
USP3-213ENST00000559711 EEF2KO00418 725 aaKnown RBP13.14□□□□□ -0.31
USP3-213ENST00000559711 RIPK2O43353 540 aa13.14□□□□□ -0.31
USP3-213ENST00000559711 HAPLN1P10915 354 aaPredicted RBP13.14□□□□□ -0.31
USP3-213ENST00000559711 GPR15P49685 360 aa13.14□□□□□ -0.31
USP3-213ENST00000559711 ZNF844Q08AG5 666 aa13.14□□□□□ -0.31
USP3-213ENST00000559711 PAFAH1B3Q15102 231 aaKnown RBP13.14□□□□□ -0.31
USP3-213ENST00000559711 SDHAF4Q5VUM1 108 aa13.14□□□□□ -0.31
USP3-213ENST00000559711 KCNT2Q6UVM3 1135 aa13.14□□□□□ -0.31
USP3-213ENST00000559711 RNF19BQ6ZMZ0 732 aa13.14□□□□□ -0.31
USP3-213ENST00000559711 RFX8Q6ZV50 586 aa13.14□□□□□ -0.31
USP3-213ENST00000559711 CCDC25Q86WR0 208 aa13.14□□□□□ -0.31
USP3-213ENST00000559711 CDKL3Q8IVW4 592 aaPredicted RBP13.14□□□□□ -0.31
USP3-213ENST00000559711 ARHGAP18Q8N392 663 aa13.14□□□□□ -0.31
USP3-213ENST00000559711 TTC9BQ8N6N2 239 aa13.14□□□□□ -0.31
USP3-213ENST00000559711 FBXO22Q8NEZ5 403 aa13.14□□□□□ -0.31
USP3-213ENST00000559711 ARL8AQ96BM9 186 aa13.14□□□□□ -0.31
USP3-213ENST00000559711 OLFM3Q96PB7 478 aa13.14□□□□□ -0.31
USP3-213ENST00000559711 OSBPL2Q9H1P3 480 aa13.14□□□□□ -0.31
USP3-213ENST00000559711 CRISPLD1Q9H336 500 aa13.14□□□□□ -0.31
USP3-213ENST00000559711 NMUR1Q9HB89 426 aa13.14□□□□□ -0.31
USP3-213ENST00000559711 ARHGEF38Q9NXL2 777 aa13.14□□□□□ -0.31
USP3-213ENST00000559711 NLRC5Q86WI3 1866 aa13.14□□□□□ -0.31
USP3-213ENST00000559711 A0A1W2PQH9 124 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 CARNS1A5YM72 827 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 HACD1B0YJ81 288 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 FAM72CH0Y354 149 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 DCLK1O15075 740 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 IRAK2O43187 625 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 CREB3O43889 395 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 RTN3O95197 1032 aaPredicted RBP13.13□□□□□ -0.31
USP3-213ENST00000559711 RAG1P15918 1043 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 RBL1P28749 1068 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 CTCFP49711 727 aaPredicted RBP13.13□□□□□ -0.31
USP3-213ENST00000559711 ARPP19P56211 112 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 WDR5P61964 334 aaKnown RBP13.13□□□□□ -0.31
USP3-213ENST00000559711 USP46P62068 366 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 DEFB103AP81534 67 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 IFRD2Q12894 506 aaPredicted RBP13.13□□□□□ -0.31
USP3-213ENST00000559711 SLC29A2Q14542 456 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 SLC45A4Q5BKX6 768 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 BRMS1LQ5PSV4 323 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 CEP85LQ5SZL2 805 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 FAM72AQ5TYM5 149 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 DENND2CQ68D51 928 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 FAM72DQ6L9T8 149 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 MSANTD2Q6P1R3 559 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 PRSS55Q6UWB4 352 aaPredicted RBP13.13□□□□□ -0.31
USP3-213ENST00000559711 DENND5BQ6ZUT9 1274 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 HOOK3Q86VS8 718 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 FAM72BQ86X60 149 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 PPIL6Q8IXY8 311 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 TMEM199Q8N511 208 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 NAT8LQ8N9F0 302 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 OR2W6PQ8NHA6 318 aa13.13□□□□□ -0.31
USP3-213ENST00000559711 CPT1BQ92523 772 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms