RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 LRFN3Q9BTN0 628 aa21.13■□□□□ 0.97
TSPAN3-207ENST00000559494 ADAM33Q9BZ11 813 aa21.13■□□□□ 0.97
TSPAN3-207ENST00000559494 FOXQ1Q9C009 403 aa21.13■□□□□ 0.97
TSPAN3-207ENST00000559494 METTL5Q9NRN9 209 aaKnown RBP21.13■□□□□ 0.97
TSPAN3-207ENST00000559494 TLR6Q9Y2C9 796 aa21.13■□□□□ 0.97
TSPAN3-207ENST00000559494 MTF2Q9Y483 593 aaPredicted RBP21.13■□□□□ 0.97
TSPAN3-207ENST00000559494 TCRBV5S1A1TA0A578 114 aa21.12■□□□□ 0.97
TSPAN3-207ENST00000559494 MAN2B1O00754 1011 aa21.12■□□□□ 0.97
TSPAN3-207ENST00000559494 IRAK2O43187 625 aa21.12■□□□□ 0.97
TSPAN3-207ENST00000559494 FTLP02792 175 aaPredicted RBP21.12■□□□□ 0.97
TSPAN3-207ENST00000559494 TFE3P19532 575 aaPredicted RBP21.12■□□□□ 0.97
TSPAN3-207ENST00000559494 FLT3P36888 993 aa21.12■□□□□ 0.97
TSPAN3-207ENST00000559494 HARS2P49590 506 aaKnown RBP21.12■□□□□ 0.97
TSPAN3-207ENST00000559494 NNTQ13423 1086 aa21.12■□□□□ 0.97
TSPAN3-207ENST00000559494 ARCQ7LC44 396 aa21.12■□□□□ 0.97
TSPAN3-207ENST00000559494 ZNF687Q8N1G0 1237 aa21.12■□□□□ 0.97
TSPAN3-207ENST00000559494 FBXL6Q8N531 539 aa21.12■□□□□ 0.97
TSPAN3-207ENST00000559494 NT5C3BQ969T7 300 aa21.12■□□□□ 0.97
TSPAN3-207ENST00000559494 VCPIP1Q96JH7 1222 aa21.12■□□□□ 0.97
TSPAN3-207ENST00000559494 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.12■□□□□ 0.97
TSPAN3-207ENST00000559494 SPHK2Q9NRA0 654 aa21.12■□□□□ 0.97
TSPAN3-207ENST00000559494 AKR1B15C9JRZ8 316 aaPredicted RBP21.11■□□□□ 0.97
TSPAN3-207ENST00000559494 PI15O43692 258 aa21.11■□□□□ 0.97
TSPAN3-207ENST00000559494 RTN2O75298 545 aa21.11■□□□□ 0.97
TSPAN3-207ENST00000559494 EIF4A3P38919 411 aaKnown RBP21.11■□□□□ 0.97
TSPAN3-207ENST00000559494 ZC3H12AQ5D1E8 599 aaKnown RBP21.11■□□□□ 0.97
TSPAN3-207ENST00000559494 OTUD1Q5VV17 481 aaPredicted RBP21.11■□□□□ 0.97
TSPAN3-207ENST00000559494 NAIF1Q69YI7 327 aaPredicted RBP21.11■□□□□ 0.97
TSPAN3-207ENST00000559494 UNC45BQ8IWX7 931 aa21.11■□□□□ 0.97
TSPAN3-207ENST00000559494 EMC1Q8N766 993 aa21.11■□□□□ 0.97
TSPAN3-207ENST00000559494 JOSD2Q8TAC2 188 aa21.11■□□□□ 0.97
TSPAN3-207ENST00000559494 P2RY11Q96G91 374 aa21.11■□□□□ 0.97
TSPAN3-207ENST00000559494 MSANTD3Q96H12 275 aa21.11■□□□□ 0.97
TSPAN3-207ENST00000559494 ISCUQ9H1K1 167 aa21.11■□□□□ 0.97
TSPAN3-207ENST00000559494 FBRSL1Q9HCM7 1045 aaKnown RBP21.11■□□□□ 0.97
TSPAN3-207ENST00000559494 LTB4R2Q9NPC1 389 aa21.11■□□□□ 0.97
TSPAN3-207ENST00000559494 ABHD10Q9NUJ1 306 aa21.11■□□□□ 0.97
TSPAN3-207ENST00000559494 RRN3Q9NYV6 651 aa21.11■□□□□ 0.97
TSPAN3-207ENST00000559494 CALCOCO1Q9P1Z2 691 aa21.11■□□□□ 0.97
TSPAN3-207ENST00000559494 A0A087X0T9 212 aa21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 FAM170BA6NMN3 283 aa21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 M0QYT0 321 aa21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 FAM228BP0C875 321 aa21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 RRM1P23921 792 aa21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 TARSP26639 723 aaKnown RBP21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 GBP1P32455 592 aa21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 GALK1P51570 392 aa21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 CLCN5P51795 746 aa21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 PON2Q15165 354 aa21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 NUGGCQ68CJ6 796 aa21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 PPP1R2P3Q6NXS1 205 aa21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 FAM217AQ8IXS0 508 aa21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 TC2NQ8N9U0 490 aa21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 C3orf20Q8ND61 904 aa21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 AZIN2Q96A70 460 aa21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 NELL2Q99435 816 aa21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 CHP1Q99653 195 aa21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 FAM204AQ9H8W3 233 aa21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 DDIT4Q9NX09 232 aa21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 STOML2Q9UJZ1 356 aa21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 NDRG2Q9UN36 371 aaKnown RBP21.1■□□□□ 0.97
TSPAN3-207ENST00000559494 SYNJ2BP-COX16A0A087WUM0 186 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 SIGLEC16A6NMB1 481 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 ADH1CP00326 375 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 ADH5P11766 374 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 KRT3P12035 628 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 RFC1P35251 1148 aaPredicted RBP21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 CHKAP35790 457 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 OPRD1P41143 372 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 SLC6A11P48066 632 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 VCPP55072 806 aaKnown RBP21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 AMPD2Q01433 879 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 GAD2Q05329 585 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 FZD5Q13467 585 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 UBXN2BQ14CS0 331 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 TSR1Q2NL82 804 aaKnown RBP21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 SLC25A52Q3SY17 297 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 ASTLQ6HA08 431 aaPredicted RBP21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 TPGS1Q6ZTW0 290 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 CNGA4Q8IV77 575 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 CPXM2Q8N436 756 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 RXFP2Q8WXD0 754 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 CFAP57Q96MR6 1250 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 TBCBQ99426 244 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 SELENOOQ9BVL4 669 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 ZNHIT6Q9NWK9 470 aaKnown RBP21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 COX16Q9P0S2 106 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 MRPS17Q9Y2R5 130 aaKnown RBP21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 SIT1Q9Y3P8 196 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 ATG2BQ96BY7 2078 aa21.09■□□□□ 0.97
TSPAN3-207ENST00000559494 GOLGA6L7A0A1B0GV03 622 aa21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 C2CD4BA6NLJ0 364 aa21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 GFRA2O00451 464 aa21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 TRDMT1O14717 391 aaKnown RBP21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 HOXC11O43248 304 aaPredicted RBP21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 ACSL4O60488 711 aa21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 LATS1O95835 1130 aa21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 AOC1P19801 751 aa21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 SULT1E1P49888 294 aa21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 NME3Q13232 169 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms