RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 HSF2BPO75031 334 aa19.49■□□□□ 0.71
CASC4-209ENST00000559222 TRUB2O95900 331 aaKnown RBP19.49■□□□□ 0.71
CASC4-209ENST00000559222 ADH1CP00326 375 aa19.49■□□□□ 0.71
CASC4-209ENST00000559222 MMP8P22894 467 aa19.49■□□□□ 0.71
CASC4-209ENST00000559222 TBX4P57082 545 aa19.49■□□□□ 0.71
CASC4-209ENST00000559222 RNASE9P60153 205 aaKnown RBP19.49■□□□□ 0.71
CASC4-209ENST00000559222 NR1H3Q13133 447 aa19.49■□□□□ 0.71
CASC4-209ENST00000559222 FIGNQ5HY92 759 aa19.49■□□□□ 0.71
CASC4-209ENST00000559222 FAM102AQ5T9C2 384 aaPredicted RBP19.49■□□□□ 0.71
CASC4-209ENST00000559222 NADSYN1Q6IA69 706 aa19.49■□□□□ 0.71
CASC4-209ENST00000559222 BEND5Q7L4P6 421 aa19.49■□□□□ 0.71
CASC4-209ENST00000559222 ZNF571Q7Z3V5 609 aaPredicted RBP19.49■□□□□ 0.71
CASC4-209ENST00000559222 MAML2Q8IZL2 1156 aaPredicted RBP19.49■□□□□ 0.71
CASC4-209ENST00000559222 CPLX3Q8WVH0 158 aa19.49■□□□□ 0.71
CASC4-209ENST00000559222 SLC39A13Q96H72 371 aa19.49■□□□□ 0.71
CASC4-209ENST00000559222 NELL2Q99435 816 aa19.49■□□□□ 0.71
CASC4-209ENST00000559222 CHRDQ9H2X0 955 aa19.49■□□□□ 0.71
CASC4-209ENST00000559222 ASNSD1Q9NWL6 643 aa19.49■□□□□ 0.71
CASC4-209ENST00000559222 COX16Q9P0S2 106 aa19.49■□□□□ 0.71
CASC4-209ENST00000559222 CACNA1IQ9P0X4 2223 aa19.48■□□□□ 0.71
CASC4-209ENST00000559222 TSPAN3O60637 253 aa19.48■□□□□ 0.71
CASC4-209ENST00000559222 CHRM1P11229 460 aaPredicted RBP19.48■□□□□ 0.71
CASC4-209ENST00000559222 SLC6A4P31645 630 aa19.48■□□□□ 0.71
CASC4-209ENST00000559222 FLT3P36888 993 aa19.48■□□□□ 0.71
CASC4-209ENST00000559222 CENPCQ03188 943 aa19.48■□□□□ 0.71
CASC4-209ENST00000559222 MTAPQ13126 283 aa19.48■□□□□ 0.71
CASC4-209ENST00000559222 EIF4EBP2Q13542 120 aaPredicted RBP19.48■□□□□ 0.71
CASC4-209ENST00000559222 EFHC1Q5JVL4 640 aa19.48■□□□□ 0.71
CASC4-209ENST00000559222 SFMBT2Q5VUG0 894 aa19.48■□□□□ 0.71
CASC4-209ENST00000559222 TOGARAM2Q6ZUX3 1019 aa19.48■□□□□ 0.71
CASC4-209ENST00000559222 FAM217AQ8IXS0 508 aa19.48■□□□□ 0.71
CASC4-209ENST00000559222 ZNF397Q8NF99 534 aaPredicted RBP19.48■□□□□ 0.71
CASC4-209ENST00000559222 BBS2Q9BXC9 721 aa19.48■□□□□ 0.71
CASC4-209ENST00000559222 DCLK3Q9C098 648 aa19.48■□□□□ 0.71
CASC4-209ENST00000559222 HAUS4Q9H6D7 363 aa19.48■□□□□ 0.71
CASC4-209ENST00000559222 METTL5Q9NRN9 209 aaKnown RBP19.48■□□□□ 0.71
CASC4-209ENST00000559222 AIPL1Q9NZN9 384 aa19.48■□□□□ 0.71
CASC4-209ENST00000559222 MARK1Q9P0L2 795 aa19.48■□□□□ 0.71
CASC4-209ENST00000559222 CLEC4EQ9ULY5 219 aa19.48■□□□□ 0.71
CASC4-209ENST00000559222 GFRA2O00451 464 aa19.47■□□□□ 0.71
CASC4-209ENST00000559222 TULP3O75386 442 aa19.47■□□□□ 0.71
CASC4-209ENST00000559222 GLI1P08151 1106 aa19.47■□□□□ 0.71
CASC4-209ENST00000559222 TYRP14679 529 aa19.47■□□□□ 0.71
CASC4-209ENST00000559222 RPS9P46781 194 aaKnown RBP19.47■□□□□ 0.71
CASC4-209ENST00000559222 GAD2Q05329 585 aa19.47■□□□□ 0.71
CASC4-209ENST00000559222 RAB6CQ53S08 254 aa19.47■□□□□ 0.71
CASC4-209ENST00000559222 FAM133BQ5BKY9 247 aaKnown RBP19.47■□□□□ 0.71
CASC4-209ENST00000559222 ZC3H12AQ5D1E8 599 aaKnown RBP19.47■□□□□ 0.71
CASC4-209ENST00000559222 FYB2Q5VWT5 728 aa19.47■□□□□ 0.71
CASC4-209ENST00000559222 RFWD3Q6PCD5 774 aa19.47■□□□□ 0.71
CASC4-209ENST00000559222 TRIM72Q6ZMU5 477 aa19.47■□□□□ 0.71
CASC4-209ENST00000559222 MON1BQ7L1V2 547 aa19.47■□□□□ 0.71
CASC4-209ENST00000559222 EMC1Q8N766 993 aa19.47■□□□□ 0.71
CASC4-209ENST00000559222 JOSD2Q8TAC2 188 aa19.47■□□□□ 0.71
CASC4-209ENST00000559222 SERPINB11Q96P15 392 aa19.47■□□□□ 0.71
CASC4-209ENST00000559222 RAB6CQ9H0N0 254 aa19.47■□□□□ 0.71
CASC4-209ENST00000559222 FAM204AQ9H8W3 233 aa19.47■□□□□ 0.71
CASC4-209ENST00000559222 ZDHHC4Q9NPG8 344 aa19.47■□□□□ 0.71
CASC4-209ENST00000559222 SPATA6Q9NWH7 488 aaPredicted RBP19.47■□□□□ 0.71
CASC4-209ENST00000559222 TLR6Q9Y2C9 796 aa19.47■□□□□ 0.71
CASC4-209ENST00000559222 HCN4Q9Y3Q4 1203 aa19.47■□□□□ 0.71
CASC4-209ENST00000559222 ARIH1Q9Y4X5 557 aaPredicted RBP19.47■□□□□ 0.71
CASC4-209ENST00000559222 A0A1W2PQJ5 194 aa19.46■□□□□ 0.71
CASC4-209ENST00000559222 H0Y858 1186 aa19.46■□□□□ 0.71
CASC4-209ENST00000559222 K7EQS6 105 aa19.46■□□□□ 0.71
CASC4-209ENST00000559222 RNF40O75150 1001 aa19.46■□□□□ 0.71
CASC4-209ENST00000559222 MOCS2O96007 188 aaPredicted RBP19.46■□□□□ 0.71
CASC4-209ENST00000559222 PLEKP08567 350 aaPredicted RBP19.46■□□□□ 0.71
CASC4-209ENST00000559222 PRKCIP41743 596 aa19.46■□□□□ 0.71
CASC4-209ENST00000559222 HARS2P49590 506 aaKnown RBP19.46■□□□□ 0.71
CASC4-209ENST00000559222 ATXN1P54253 815 aaKnown RBP19.46■□□□□ 0.71
CASC4-209ENST00000559222 SEC13P55735 322 aa19.46■□□□□ 0.71
CASC4-209ENST00000559222 GRSF1Q12849 480 aaKnown RBP eCLIP19.46■□□□□ 0.71
CASC4-209ENST00000559222 ANGPT1Q15389 498 aa19.46■□□□□ 0.71
CASC4-209ENST00000559222 HGSNATQ68CP4 663 aa19.46■□□□□ 0.71
CASC4-209ENST00000559222 C1orf228Q6PIY5 440 aa19.46■□□□□ 0.71
CASC4-209ENST00000559222 TSSK4Q6SA08 328 aa19.46■□□□□ 0.71
CASC4-209ENST00000559222 PRICKLE1Q96MT3 831 aaPredicted RBP19.46■□□□□ 0.71
CASC4-209ENST00000559222 EDEM3Q9BZQ6 932 aa19.46■□□□□ 0.71
CASC4-209ENST00000559222 DDIT4Q9NX09 232 aa19.46■□□□□ 0.71
CASC4-209ENST00000559222 STOML2Q9UJZ1 356 aa19.46■□□□□ 0.71
CASC4-209ENST00000559222 TMEM59LQ9UK28 342 aa19.46■□□□□ 0.71
CASC4-209ENST00000559222 CAPN11Q9UMQ6 739 aa19.46■□□□□ 0.71
CASC4-209ENST00000559222 ITIH6Q6UXX5 1313 aa19.46■□□□□ 0.71
CASC4-209ENST00000559222 TMCO5BA8MYB1 307 aa19.45■□□□□ 0.7
CASC4-209ENST00000559222 DDX3XO00571 662 aaKnown RBP eCLIP19.45■□□□□ 0.71e-16■■■■■ 46.1
CASC4-209ENST00000559222 NCAM2O15394 837 aa19.45■□□□□ 0.7
CASC4-209ENST00000559222 CACNG3O60359 315 aa19.45■□□□□ 0.7
CASC4-209ENST00000559222 PENKP01210 267 aaPredicted RBP19.45■□□□□ 0.7
CASC4-209ENST00000559222 CASP14P31944 242 aa19.45■□□□□ 0.7
CASC4-209ENST00000559222 NSFP46459 744 aaKnown RBP19.45■□□□□ 0.7
CASC4-209ENST00000559222 SATB1Q01826 763 aa19.45■□□□□ 0.7
CASC4-209ENST00000559222 RING1Q06587 406 aa19.45■□□□□ 0.7
CASC4-209ENST00000559222 NME3Q13232 169 aa19.45■□□□□ 0.7
CASC4-209ENST00000559222 NNTQ13423 1086 aa19.45■□□□□ 0.7
CASC4-209ENST00000559222 LRRC32Q14392 662 aa19.45■□□□□ 0.7
CASC4-209ENST00000559222 PHF13Q86YI8 300 aaPredicted RBP19.45■□□□□ 0.7
CASC4-209ENST00000559222 ZDHHC17Q8IUH5 632 aa19.45■□□□□ 0.7
CASC4-209ENST00000559222 CPXM2Q8N436 756 aa19.45■□□□□ 0.7
CASC4-209ENST00000559222 PNKPQ96T60 521 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms