RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 FAM155AB1AL88 458 aaPredicted RBP11.67□□□□□ -0.54
CLPX-204ENST00000559152 PPP1R12AO14974 1030 aaPredicted RBP11.67□□□□□ -0.54
CLPX-204ENST00000559152 MT-ND3P03897 115 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 CTSHP09668 335 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 MLNP12872 115 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 GOT1P17174 413 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 TAC1P20366 129 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 AMPD1P23109 780 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 WDR4P57081 412 aaKnown RBP11.67□□□□□ -0.54
CLPX-204ENST00000559152 SEMA5AQ13591 1074 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 PDK4Q16654 411 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 UPP1Q16831 310 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 ARL13BQ3SXY8 428 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 FAM35AQ86V20 835 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 SLC26A11Q86WA9 606 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 C4orf33Q8N1A6 199 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 PCSK9Q8NBP7 692 aaKnown RBP11.67□□□□□ -0.54
CLPX-204ENST00000559152 LRRC8CQ8TDW0 803 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 RNF139Q8WU17 664 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 MRRFQ96E11 262 aaKnown RBP11.67□□□□□ -0.54
CLPX-204ENST00000559152 PGAP3Q96FM1 320 aaPredicted RBP11.67□□□□□ -0.54
CLPX-204ENST00000559152 UROC1Q96N76 676 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 ADAM33Q9BZ11 813 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 XPNPEP3Q9NQH7 507 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 ARHGEF4Q9NR80 690 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 KLHL14Q9P2G3 628 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 ZNF180Q9UJW8 692 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 STARD13Q9Y3M8 1113 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 A0A0A0MRY4 1105 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 NCAM2O15394 837 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 OPHN1O60890 802 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 ADAMTS4O75173 837 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 BEST1O76090 585 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 CTGFP29279 349 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 RPA3P35244 121 aaPredicted RBP11.67□□□□□ -0.54
CLPX-204ENST00000559152 THPOP40225 353 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 HCAR3P49019 387 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 GLUD2P49448 558 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 FLT3LGP49771 235 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 NRLP54845 237 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 DAOAP59103 153 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 SCAPQ12770 1279 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 SLC10A2Q12908 348 aaPredicted RBP11.67□□□□□ -0.54
CLPX-204ENST00000559152 PTK7Q13308 1070 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 RAB41Q5JT25 222 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 AGMOQ6ZNB7 445 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 CCNJLQ8IV13 435 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 IRGQQ8WZA9 623 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 PCED1BQ96HM7 432 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 SPATA13Q96N96 652 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 ACBD6Q9BR61 282 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 SQORQ9Y6N5 450 aa11.67□□□□□ -0.54
CLPX-204ENST00000559152 A0A0U1RQF3 1178 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 A0A1W2PPM1 405 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 FAM155BO75949 473 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 KRT37O76014 449 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 CST5P28325 142 aaPredicted RBP11.66□□□□□ -0.54
CLPX-204ENST00000559152 MAGEA3P43357 314 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 SCTRP47872 440 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 SCNN1GP51170 649 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 SLC20A2Q08357 652 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 PAFAH1B3Q15102 231 aaKnown RBP11.66□□□□□ -0.54
CLPX-204ENST00000559152 MAPRE1Q15691 268 aaKnown RBP11.66□□□□□ -0.54
CLPX-204ENST00000559152 KBTBD12Q3ZCT8 623 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 TTC39BQ5VTQ0 682 aaPredicted RBP11.66□□□□□ -0.54
CLPX-204ENST00000559152 KIAA0319Q5VV43 1072 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 CYS1Q717R9 158 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 CAND1Q86VP6 1230 aaKnown RBP11.66□□□□□ -0.54
CLPX-204ENST00000559152 LRRC6Q86X45 466 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 IGDCC3Q8IVU1 814 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 ZNF784Q8NCA9 323 aaPredicted RBP11.66□□□□□ -0.54
CLPX-204ENST00000559152 MZB1Q8WU39 189 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 ULBP1Q9BZM6 244 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 BRD8Q9H0E9 1235 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 EIF2B3Q9NR50 452 aaKnown RBP11.66□□□□□ -0.54
CLPX-204ENST00000559152 HAUS2Q9NVX0 235 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 PADI3Q9ULW8 664 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 DOCK3Q8IZD9 2030 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 MEIS3P2A8K0S8 358 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 EEF2KO00418 725 aaKnown RBP11.66□□□□□ -0.54
CLPX-204ENST00000559152 CABYRO75952 493 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 METTL18O95568 372 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 CYP11A1P05108 521 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 ASGR1P07306 291 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 PRKCHP24723 683 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 ADRA1BP35368 520 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 NDUFV1P49821 464 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 GRIK3Q13003 919 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 NME3Q13232 169 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 EFTUD2Q15029 972 aaKnown RBP eCLIP11.66□□□□□ -0.548e-6■■□□□ 13.1
CLPX-204ENST00000559152 ANKRD20A2Q5SQ80 823 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 ANKRD20A1Q5TYW2 823 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 ANKRD20A3Q5VUR7 823 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 RNF43Q68DV7 783 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 SCML4Q8N228 414 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 BANPQ8N9N5 519 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 SLC7A14Q8TBB6 771 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 LPPQ93052 612 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 MTBPQ96DY7 904 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 CFAP36Q96G28 342 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms