RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 SH3PXD2AQ5TCZ1 1133 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 TADA2BQ86TJ2 420 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 ZDHHC17Q8IUH5 632 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 DENND1CQ8IV53 801 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 ETFBKMTQ8IXQ9 262 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 CCDC105Q8IYK2 499 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 TMEM105Q8N8V8 129 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 PLD4Q96BZ4 506 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 PRICKLE1Q96MT3 831 aaPredicted RBP11.92□□□□□ -0.5
SNX1-204ENST00000559061 TBCBQ99426 244 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 LRFN3Q9BTN0 628 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 TRIM7Q9C029 511 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 ISCUQ9H1K1 167 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 TMPRSS4Q9NRS4 437 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 PIGVQ9NUD9 493 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 SEPT11Q9NVA2 429 aaKnown RBP11.92□□□□□ -0.5
SNX1-204ENST00000559061 ADAM22Q9P0K1 906 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 FBXL21Q9UKT6 434 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 CLEC4EQ9ULY5 219 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 SH3BP1Q9Y3L3 701 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 ZDBF2Q9HCK1 2354 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 WDFY4Q6ZS81 3184 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 GOLGA6L7A0A1B0GV03 622 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 KCNU1A8MYU2 1149 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 TRIM24O15164 1050 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 HOXC11O43248 304 aaPredicted RBP11.91□□□□□ -0.5
SNX1-204ENST00000559061 TPM3P06753 285 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 FECHP22830 423 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 RFC1P35251 1148 aaPredicted RBP11.91□□□□□ -0.5
SNX1-204ENST00000559061 EIF4A3P38919 411 aaKnown RBP11.91□□□□□ -0.5
SNX1-204ENST00000559061 NSFP46459 744 aaKnown RBP11.91□□□□□ -0.5
SNX1-204ENST00000559061 SLC6A11P48066 632 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 IFNAR2P48551 515 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 MLLT6P55198 1093 aaPredicted RBP11.91□□□□□ -0.5
SNX1-204ENST00000559061 RPL7AP62424 266 aaKnown RBP11.91□□□□□ -0.5
SNX1-204ENST00000559061 COG7P83436 770 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 PRKCQQ04759 706 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 RING1Q06587 406 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 CCDC14Q49A88 953 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 ZC3H12AQ5D1E8 599 aaKnown RBP11.91□□□□□ -0.5
SNX1-204ENST00000559061 FYB2Q5VWT5 728 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 RNF43Q68DV7 783 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 FSTL4Q6MZW2 842 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 CC2D1AQ6P1N0 951 aaPredicted RBP11.91□□□□□ -0.5
SNX1-204ENST00000559061 TOGARAM2Q6ZUX3 1019 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 ARCQ7LC44 396 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 C3orf20Q8ND61 904 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 OR8K1Q8NGG5 319 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 RNF139Q8WU17 664 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 ATP2A3Q93084 1043 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 CFAP57Q96MR6 1250 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 NUCKS1Q9H1E3 243 aaKnown RBP11.91□□□□□ -0.5
SNX1-204ENST00000559061 SYNCQ9H7C4 482 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 LTB4R2Q9NPC1 389 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 THG1LQ9NWX6 298 aaKnown RBP11.91□□□□□ -0.5
SNX1-204ENST00000559061 MARK1Q9P0L2 795 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 ADAMTS1Q9UHI8 967 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 HCN2Q9UL51 889 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 TLR6Q9Y2C9 796 aa11.91□□□□□ -0.5
SNX1-204ENST00000559061 KANSL1LA0AUZ9 987 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 PRR33A8MZF0 331 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 TRDMT1O14717 391 aaKnown RBP11.9□□□□□ -0.5
SNX1-204ENST00000559061 PENKP01210 267 aaPredicted RBP11.9□□□□□ -0.5
SNX1-204ENST00000559061 FTLP02792 175 aaPredicted RBP11.9□□□□□ -0.5
SNX1-204ENST00000559061 CCDC172P0C7W6 258 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 GZMAP12544 262 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 HOXC13P31276 330 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 NOS2P35228 1153 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 IRAK1P51617 712 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 TBX4P57082 545 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 RNASE9P60153 205 aaKnown RBP11.9□□□□□ -0.5
SNX1-204ENST00000559061 GFPT1Q06210 699 aaPredicted RBP11.9□□□□□ -0.5
SNX1-204ENST00000559061 MAMLD1Q13495 774 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 GAS6Q14393 721 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 PON2Q15165 354 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 C15orf59Q2T9L4 293 aaPredicted RBP11.9□□□□□ -0.5
SNX1-204ENST00000559061 TDRD12Q587J7 1177 aaKnown RBP11.9□□□□□ -0.5
SNX1-204ENST00000559061 TMEM196Q5HYL7 178 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 PIK3R6Q5UE93 754 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 ASTLQ6HA08 431 aaPredicted RBP11.9□□□□□ -0.5
SNX1-204ENST00000559061 PLEKHA7Q6IQ23 1121 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 RALGPS2Q86X27 583 aaPredicted RBP11.9□□□□□ -0.5
SNX1-204ENST00000559061 DRC7Q8IY82 874 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 CPXM2Q8N436 756 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 ARFGAP1Q8N6T3 406 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 PJA1Q8NG27 643 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 CSGALNACT1Q8TDX6 532 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 RXFP2Q8WXD0 754 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 OTUB2Q96DC9 234 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 ARHGEF26Q96DR7 871 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 PGAP3Q96FM1 320 aaPredicted RBP11.9□□□□□ -0.5
SNX1-204ENST00000559061 SERPINB11Q96P15 392 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 PRMT1Q99873 361 aaKnown RBP11.9□□□□□ -0.5
SNX1-204ENST00000559061 PACSIN1Q9BY11 444 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 SPHK2Q9NRA0 654 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 RBM12Q9NTZ6 932 aaKnown RBP11.9□□□□□ -0.5
SNX1-204ENST00000559061 C2orf42Q9NWW7 574 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.9□□□□□ -0.5
SNX1-204ENST00000559061 TBC1D14Q9P2M4 693 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 STRIP2Q9ULQ0 834 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms