RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 FBXO4Q9UKT5 387 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 TCRBV5S1A1TA0A578 114 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 CHURC1-FNTBB4DL54 471 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 CACNG3O60359 315 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 PAPSS2O95340 614 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 TYRP14679 529 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 PXNP49023 591 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 IRAK1P51617 712 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 ATXN1P54253 815 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 CSTF1Q05048 431 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 KDSRQ06136 332 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 LRRC32Q14392 662 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 ZNF528Q3MIS6 628 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 SMYD5Q6GMV2 418 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 BEND5Q7L4P6 421 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 PHLDB2Q86SQ0 1253 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 XYLT1Q86Y38 959 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 DEFB106AQ8N104 65 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 SPEM1Q8N4L4 309 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 CPA5Q8WXQ8 436 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 NT5C3BQ969T7 300 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 OTUB2Q96DC9 234 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 PRICKLE1Q96MT3 831 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 IER2Q9BTL4 223 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 MAGEB5Q9BZ81 275 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 TMPRSS4Q9NRS4 437 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 TAS2R14Q9NYV8 317 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 TMEM59LQ9UK28 342 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 OTOGLQ3ZCN5 2332 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 ABCA7Q8IZY2 2146 aa13.19□□□□□ -0.3
RABGGTA-207ENST00000558936 DOCK4Q8N1I0 1966 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 SGK1O00141 431 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 SLC9A3R1O14745 358 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 MED7O43513 233 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 HRO43593 1189 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 FBXO21O94952 628 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 KAT7O95251 611 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 NCAM1P13591 858 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 DRD1P21728 446 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 HOXD9P28356 352 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 FLT3P36888 993 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 SEC13P55735 322 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 SLC8A3P57103 927 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 COG7P83436 770 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 FANCCQ00597 558 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 AMPD2Q01433 879 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 NR1H3Q13133 447 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 GEN1Q17RS7 908 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 RFWD3Q6PCD5 774 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 ARHGAP18Q8N392 663 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 SYNPOQ8N3V7 929 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 CPXM2Q8N436 756 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 IL17RCQ8NAC3 791 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 SUMF1Q8NBK3 374 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 RPLP0P6Q8NHW5 317 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 SLC30A5Q8TAD4 765 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 PRMT1Q99873 361 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 NACA2Q9H009 215 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 HBS1LQ9Y450 684 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 DMXL1Q9Y485 3027 aa13.18□□□□□ -0.3
RABGGTA-207ENST00000558936 CKAP5Q14008 2032 aa13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 ZFHX2Q9C0A1 2572 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 KCNU1A8MYU2 1149 aa13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 NEDD8-MDP1E9PL57 170 aa13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 IRAK2O43187 625 aa13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 TSPAN3O60637 253 aa13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 TRUB2O95900 331 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 CDK11BP21127 795 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 EIF2DP41214 584 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 ACADSBP45954 432 aa13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 YWHAZP63104 245 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 CDR2Q01850 454 aa13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 SLC6A3Q01959 620 aa13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 GAD2Q05329 585 aa13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 GRSF1Q12849 480 aaKnown RBP eCLIP13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 ANO4Q32M45 955 aa13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 C2orf27AQ580R0 203 aa13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 ZC3H12AQ5D1E8 599 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 SH3PXD2AQ5TCZ1 1133 aa13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 NAA35Q5VZE5 725 aa13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 SLC26A9Q7LBE3 791 aa13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 KIAA0907Q7Z7F0 614 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 ZNF397Q8NF99 534 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 PLD4Q96BZ4 506 aa13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 PNKPQ96T60 521 aa13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 NPY6RQ99463 290 aa13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 BBS2Q9BXC9 721 aa13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 NUCKS1Q9H1E3 243 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 LAMA1P25391 3075 aa13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 SDK1Q7Z5N4 2213 aa13.17□□□□□ -0.3
RABGGTA-207ENST00000558936 WASH3PC4AMC7 463 aa13.16□□□□□ -0.3
RABGGTA-207ENST00000558936 MMP8P22894 467 aa13.16□□□□□ -0.3
RABGGTA-207ENST00000558936 HLA-FP30511 346 aa13.16□□□□□ -0.3
RABGGTA-207ENST00000558936 KRT9P35527 623 aa13.16□□□□□ -0.3
RABGGTA-207ENST00000558936 CXCL12P48061 93 aa13.16□□□□□ -0.3
RABGGTA-207ENST00000558936 FNTBP49356 437 aa13.16□□□□□ -0.3
RABGGTA-207ENST00000558936 TBX4P57082 545 aa13.16□□□□□ -0.3
RABGGTA-207ENST00000558936 FSCBQ5H9T9 825 aa13.16□□□□□ -0.3
RABGGTA-207ENST00000558936 FKBP15Q5T1M5 1219 aa13.16□□□□□ -0.3
RABGGTA-207ENST00000558936 PIK3R6Q5UE93 754 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms