RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 SGK1O00141 431 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 DCLK1O15075 740 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 CAVIN2O95810 425 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 S1PR4O95977 384 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 ADRB1P08588 477 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 RALAP11233 206 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 RARGP13631 454 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 HOXB2P14652 356 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 DPP6P42658 865 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 KIF11P52732 1056 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 BCAT1P54687 386 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 SH3BP2P78314 561 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 NUCB2P80303 420 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 FKBP3Q00688 224 aaKnown RBP8.47□□□□□ -1.05
TRAF3-205ENST00000558700 LRRC63Q05C16 580 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 MESP2Q0VG99 397 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 STIM1Q13586 685 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 BYSLQ13895 437 aaKnown RBP8.47□□□□□ -1.05
TRAF3-205ENST00000558700 ZNF394Q53GI3 561 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 C10orf120Q5SQS8 335 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 PPP1R26Q5T8A7 1209 aaPredicted RBP8.47□□□□□ -1.05
TRAF3-205ENST00000558700 STPG1Q5TH74 334 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 ZNF658Q5TYW1 1059 aaPredicted RBP8.47□□□□□ -1.05
TRAF3-205ENST00000558700 VASH1Q7L8A9 365 aaPredicted RBP8.47□□□□□ -1.05
TRAF3-205ENST00000558700 SFTPA1Q8IWL2 248 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 RGL4Q8IZJ4 473 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 FMR1NBQ8N0W7 255 aaPredicted RBP8.47□□□□□ -1.05
TRAF3-205ENST00000558700 ARHGAP18Q8N392 663 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 HMGB4Q8WW32 186 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 SMARCE1Q969G3 411 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 BBS2Q9BXC9 721 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 KLF16Q9BXK1 252 aaPredicted RBP8.47□□□□□ -1.05
TRAF3-205ENST00000558700 NMUR1Q9HB89 426 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 CISHQ9NSE2 258 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 RAB20Q9NX57 234 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 CLIC5Q9NZA1 410 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 WDR35Q9P2L0 1181 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 RASAL2Q9UJF2 1139 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 SPTBN2O15020 2390 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 PSMA7O14818 248 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 NDUFB5O43674 189 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 STC2O76061 302 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 TBX18O95935 607 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 TYRP14679 529 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 BCKDHBP21953 392 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 TBXAS1P24557 533 aaPredicted RBP8.46□□□□□ -1.06
TRAF3-205ENST00000558700 P2RY2P41231 377 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 PPP1R2P41236 205 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 PRCPP42785 496 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 PLA2G4AP47712 749 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 DHPSP49366 369 aaPredicted RBP8.46□□□□□ -1.06
TRAF3-205ENST00000558700 PGFP49763 221 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 NAA30Q147X3 362 aaPredicted RBP8.46□□□□□ -1.06
TRAF3-205ENST00000558700 RNF43Q68DV7 783 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 ARHGAP17Q68EM7 881 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 TCEAL6Q6IPX3 200 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 SDE2Q6IQ49 451 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 Q6ZNB5 142 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 TPGS1Q6ZTW0 290 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 RSRC2Q7L4I2 434 aaKnown RBP8.46□□□□□ -1.06
TRAF3-205ENST00000558700 LPCAT2Q7L5N7 544 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 TMEM25Q86YD3 366 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 MIB1Q86YT6 1006 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 ZC3H3Q8IXZ2 948 aaKnown RBP8.46□□□□□ -1.06
TRAF3-205ENST00000558700 PGBD3Q8N328 593 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 NAT16Q8N8M0 369 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 OLIG1Q8TAK6 271 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 SEMA4DQ92854 862 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 TCEAL3Q969E4 200 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 WBP2Q969T9 261 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 EEF2KMTQ96G04 330 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 TMEM176AQ96HP8 235 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 HEXIM2Q96MH2 286 aaKnown RBP8.46□□□□□ -1.06
TRAF3-205ENST00000558700 DCLK3Q9C098 648 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 SMOC1Q9H4F8 434 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 OSER1Q9NX31 292 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 HESX1Q9UBX0 185 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 ARMCX3Q9UH62 379 aaPredicted RBP8.46□□□□□ -1.06
TRAF3-205ENST00000558700 STRIP2Q9ULQ0 834 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 INVSQ9Y283 1065 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 ZNF510Q9Y2H8 683 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 USP3Q9Y6I4 520 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 SDK1Q7Z5N4 2213 aa8.46□□□□□ -1.06
TRAF3-205ENST00000558700 CEP192Q8TEP8 1941 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 LNP1A1A4G5 178 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 ANTXRLA6NF34 631 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 MDM4O15151 490 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 AP5Z1O43299 807 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 GREM1O60565 184 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 ADAM23O75077 832 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 HNRNPLP14866 589 aaKnown RBP eCLIP8.45□□□□□ -1.06
TRAF3-205ENST00000558700 CD19P15391 556 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 VARSP26640 1264 aaKnown RBP8.45□□□□□ -1.06
TRAF3-205ENST00000558700 NTSR1P30989 418 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 CORO1AP31146 461 aaKnown RBP8.45□□□□□ -1.06
TRAF3-205ENST00000558700 DGKGP49619 791 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 RAD23BP54727 409 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 COG7P83436 770 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 BST2Q10589 180 aaKnown RBP8.45□□□□□ -1.06
TRAF3-205ENST00000558700 CUL2Q13617 745 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms