RNA–Protein interactions for RNA: ENST00000558518.5

LDLR-208, Transcript of low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDLR, Length 3,617 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-208ENST00000558518 F8W8V4 182 aa11.69□□□□□ -0.54
LDLR-208ENST00000558518 METTL18O95568 372 aa11.69□□□□□ -0.54
LDLR-208ENST00000558518 DESP17661 470 aa11.69□□□□□ -0.54
LDLR-208ENST00000558518 CA9Q16790 459 aa11.69□□□□□ -0.54
LDLR-208ENST00000558518 ANKRD20A4Q4UJ75 823 aa11.69□□□□□ -0.54
LDLR-208ENST00000558518 SH2D4BQ5SQS7 431 aa11.69□□□□□ -0.54
LDLR-208ENST00000558518 STRIP1Q5VSL9 837 aa11.69□□□□□ -0.54
LDLR-208ENST00000558518 KRT80Q6KB66 452 aa11.69□□□□□ -0.54
LDLR-208ENST00000558518 TSHZ1Q6ZSZ6 1077 aa11.69□□□□□ -0.54
LDLR-208ENST00000558518 APLFQ8IW19 511 aaPredicted RBP11.69□□□□□ -0.54
LDLR-208ENST00000558518 LENG8Q96PV6 779 aaPredicted RBP11.69□□□□□ -0.54
LDLR-208ENST00000558518 PEBP4Q96S96 227 aa11.69□□□□□ -0.54
LDLR-208ENST00000558518 CCT7Q99832 543 aa11.69□□□□□ -0.54
LDLR-208ENST00000558518 NUF2Q9BZD4 464 aa11.69□□□□□ -0.54
LDLR-208ENST00000558518 ANKEF1Q9NU02 776 aa11.69□□□□□ -0.54
LDLR-208ENST00000558518 UBIAD1Q9Y5Z9 338 aa11.69□□□□□ -0.54
LDLR-208ENST00000558518 TAF1LQ8IZX4 1826 aa11.69□□□□□ -0.54
LDLR-208ENST00000558518 ADAMTSL1Q8N6G6 1762 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 ZC3H11AO75152 810 aaKnown RBP eCLIP11.68□□□□□ -0.54
LDLR-208ENST00000558518 TGDSO95455 350 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 TNNC2P02585 160 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 TFPTP0C1Z6 253 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 RALBP11234 206 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 SLC18A1P54219 525 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 DUOXA2Q1HG44 320 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 ZNF667Q5HYK9 610 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 SCUBE3Q8IX30 993 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 PCDH20Q8N6Y1 951 aaKnown RBP11.68□□□□□ -0.54
LDLR-208ENST00000558518 DNAAF3Q8N9W5 541 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 BHLHE22Q8NFJ8 381 aaPredicted RBP11.68□□□□□ -0.54
LDLR-208ENST00000558518 TRAPPC12Q8WVT3 735 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 VCPIP1Q96JH7 1222 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 PXMP2Q9NR77 195 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 ARHGEF38Q9NXL2 777 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 ATAD5Q96QE3 1844 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 NPR1P16066 1061 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 MGAT1P26572 445 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 FDFT1P37268 417 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 CDH15P55291 814 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 GBE1Q04446 702 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 LSAMPQ13449 338 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 MYBPC3Q14896 1274 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 ACBD5Q5T8D3 534 aaPredicted RBP11.68□□□□□ -0.54
LDLR-208ENST00000558518 LRRC8BQ6P9F7 803 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 TMC7Q7Z402 723 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 KDELC2Q7Z4H8 507 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 ADGRF2Q8IZF7 708 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 CLEC4DQ8WXI8 215 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 CGRRF1Q99675 332 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 TMEM216Q9P0N5 145 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 SSX2IPQ9Y2D8 614 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 APOL1O14791 398 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 CXCL8P10145 99 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 SFNP31947 248 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 SLC25A11Q02978 314 aaKnown RBP11.68□□□□□ -0.54
LDLR-208ENST00000558518 TMEM62Q0P6H9 643 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 B3GNT9Q6UX72 402 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 ZNF781Q8N8C0 355 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 TWNKQ96RR1 684 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 B3GNT5Q9BYG0 378 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 RPAP3Q9H6T3 665 aaPredicted RBP11.68□□□□□ -0.54
LDLR-208ENST00000558518 PPCSQ9HAB8 311 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 ZNF70Q9UC06 446 aaPredicted RBP11.68□□□□□ -0.54
LDLR-208ENST00000558518 ARHGAP26Q9UNA1 814 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 MFHAS1Q9Y4C4 1052 aa11.68□□□□□ -0.54
LDLR-208ENST00000558518 BUD23O43709 281 aaKnown RBP11.67□□□□□ -0.54
LDLR-208ENST00000558518 PCSK6P29122 969 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 IDH3AP50213 366 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 PSMD7P51665 324 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 HDAC4P56524 1084 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 YWHAEP62258 255 aaKnown RBP11.67□□□□□ -0.54
LDLR-208ENST00000558518 SLC18A2Q05940 514 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 PPIDQ08752 370 aaKnown RBP11.67□□□□□ -0.54
LDLR-208ENST00000558518 C16orf72Q14CZ0 275 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 SLC9B1Q4ZJI4 515 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 RARS2Q5T160 578 aaKnown RBP11.67□□□□□ -0.54
LDLR-208ENST00000558518 TMEM192Q8IY95 271 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 LARGE2Q8N3Y3 721 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 KCTD17Q8N5Z5 321 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 CERKQ8TCT0 537 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 FAM149B1Q96BN6 582 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 CMTM5Q96DZ9 223 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 FBXL18Q96ME1 805 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 LPIN3Q9BQK8 851 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 Q9H521 79 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 RSAD1Q9HA92 442 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 IL1RL2Q9HB29 575 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 ASNSD1Q9NWL6 643 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 UBP1Q9NZI7 540 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 PAK5Q9P286 719 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 GNEQ9Y223 722 aaKnown RBP11.67□□□□□ -0.54
LDLR-208ENST00000558518 LAMB2P55268 1798 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 KLHL2O95198 593 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 ASLP04424 464 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 ITGB3P05106 788 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 DHRS4L1P0CG22 281 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 COX4I1P13073 169 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 ITGAXP20702 1163 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 CCR3P51677 355 aa11.67□□□□□ -0.54
LDLR-208ENST00000558518 FAM219BQ5XKK7 198 aa11.67□□□□□ -0.54
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