RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 ITGAVP06756 1048 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 EPHX1P07099 455 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 TNNI1P19237 187 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 ABCB4P21439 1286 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 CD27P26842 260 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 ATICP31939 592 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 CTSKP43235 329 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 SLC5A3P53794 718 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 CACNA2D1P54289 1103 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 BCAT1P54687 386 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 CXADRP78310 365 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 SFSWAPQ12872 951 aaKnown RBP5.46□□□□□ -1.54
SPG11-208ENST00000558155 ILKQ13418 452 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 ENPP2Q13822 863 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 BROXQ5VW32 411 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 RRAGBQ5VZM2 374 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 STXBP4Q6ZWJ1 553 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 SV2BQ7L1I2 683 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 TADA2BQ86TJ2 420 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 WDR49Q8IV35 697 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 CACTIN-AS1Q8N1I8 211 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 OR5B17Q8NGF7 314 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 OR2T3Q8NH03 318 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 SMARCD1Q96GM5 515 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 FAM84AQ96KN4 292 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 CNDP2Q96KP4 475 aaKnown RBP5.46□□□□□ -1.54
SPG11-208ENST00000558155 TNIP3Q96KP6 325 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 ARID3AQ99856 593 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 CBWD1Q9BRT8 395 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 ACE2Q9BYF1 805 aaPredicted RBP5.46□□□□□ -1.54
SPG11-208ENST00000558155 TRIM9Q9C026 710 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 DCLK3Q9C098 648 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 BTBD1Q9H0C5 482 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 LHX5Q9H2C1 402 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 C6orf106Q9H6K1 298 aaPredicted RBP5.46□□□□□ -1.54
SPG11-208ENST00000558155 SGK2Q9HBY8 427 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 TM9SF3Q9HD45 589 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 DMAP1Q9NPF5 467 aaPredicted RBP5.46□□□□□ -1.54
SPG11-208ENST00000558155 TMEM30AQ9NV96 361 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 PLK2Q9NYY3 685 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 NXF1Q9UBU9 619 aaKnown RBP5.46□□□□□ -1.54
SPG11-208ENST00000558155 DNMT3LQ9UJW3 386 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 PLA2G4CQ9UP65 541 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.46□□□□□ -1.54
SPG11-208ENST00000558155 GTF3C3Q9Y5Q9 886 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 IGSF10Q6WRI0 2623 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 HELZ2Q9BYK8 2649 aaKnown RBP5.46□□□□□ -1.54
SPG11-208ENST00000558155 DSPP15924 2871 aaKnown RBP5.46□□□□□ -1.54
SPG11-208ENST00000558155 GCN1Q92616 2671 aaKnown RBP5.46□□□□□ -1.54
SPG11-208ENST00000558155 PTPRJQ12913 1337 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 ZZEF1O43149 2961 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 DMXL2Q8TDJ6 3036 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 NUMA1Q14980 2115 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 SPEGQ15772 3267 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 A0A1B0GTQ1 180 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 CYSRT1A8MQ03 144 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 VILLO15195 856 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 YKT6O15498 198 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 TSPAN3O60637 253 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 PHACTR2O75167 634 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 AP1G2O75843 785 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 FSBPO95073 299 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 SEMA4FO95754 770 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 STAU1O95793 577 aaKnown RBP5.45□□□□□ -1.54
SPG11-208ENST00000558155 DNTTP04053 509 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 DLATP10515 647 aaKnown RBP5.45□□□□□ -1.54
SPG11-208ENST00000558155 RALAP11233 206 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 RARGP13631 454 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 IDEP14735 1019 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 TRIM21P19474 475 aaKnown RBP5.45□□□□□ -1.54
SPG11-208ENST00000558155 ACSL1P33121 698 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 COPAP53621 1224 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 MFAP3P55082 362 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 UCNP55089 124 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 RACK1P63244 317 aaKnown RBP5.45□□□□□ -1.54
SPG11-208ENST00000558155 COG7P83436 770 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 E2F1Q01094 437 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 IL9RQ01113 521 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 ZBTB16Q05516 673 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 CCDC173Q0VFZ6 552 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 KCNH2Q12809 1159 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 ZNF234Q14588 700 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 EIF4HQ15056 248 aaKnown RBP5.45□□□□□ -1.54
SPG11-208ENST00000558155 GEN1Q17RS7 908 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 PKDCCQ504Y2 493 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 HES3Q5TGS1 186 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 FBXL19Q6PCT2 694 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 KLHDC10Q6PID8 442 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 SERPINA13PQ6UXR4 307 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 PAQR9Q6ZVX9 377 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 USP49Q70CQ1 688 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 ANKS1BQ7Z6G8 1248 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 SPACA3Q8IXA5 215 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 EID2Q8N6I1 236 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 FAM181AQ8N9Y4 354 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 RDH13Q8NBN7 331 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 BHMTQ93088 406 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 SYAP1Q96A49 352 aaPredicted RBP5.45□□□□□ -1.54
SPG11-208ENST00000558155 BIRC7Q96CA5 298 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 CDK5RAP1Q96SZ6 601 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms