RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 KRT81Q14533 505 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 ATP13A4Q4VNC1 1196 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 ARHGAP15Q53QZ3 475 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 ZNF697Q5TEC3 545 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 GAREM2Q75VX8 874 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 MIB1Q86YT6 1006 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 RASGEF1CQ8N431 466 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 CCDC185Q8N715 623 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 SMG7Q92540 1137 aaKnown RBP17.52■□□□□ 0.4
SNX1-203ENST00000558040 CAPZA3Q96KX2 299 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 L2HGDHQ9H9P8 463 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 TRPC7Q9HCX4 862 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 KLHL11Q9NVR0 708 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 DNMT3BQ9UBC3 853 aaKnown RBP17.52■□□□□ 0.4
SNX1-203ENST00000558040 SLC12A6Q9UHW9 1150 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 PGRMC1O00264 195 aaKnown RBP17.51■□□□□ 0.39
SNX1-203ENST00000558040 ZNF185O15231 689 aa17.51■□□□□ 0.39
SNX1-203ENST00000558040 TBX18O95935 607 aa17.51■□□□□ 0.39
SNX1-203ENST00000558040 KDELR1P24390 212 aa17.51■□□□□ 0.39
SNX1-203ENST00000558040 ADRA1BP35368 520 aa17.51■□□□□ 0.39
SNX1-203ENST00000558040 CDH6P55285 790 aa17.51■□□□□ 0.39
SNX1-203ENST00000558040 COG7P83436 770 aa17.51■□□□□ 0.39
SNX1-203ENST00000558040 RING1Q06587 406 aa17.51■□□□□ 0.39
SNX1-203ENST00000558040 DPYSL2Q16555 572 aa17.51■□□□□ 0.39
SNX1-203ENST00000558040 VSIG1Q86XK7 387 aa17.51■□□□□ 0.39
SNX1-203ENST00000558040 CREG2Q8IUH2 290 aa17.51■□□□□ 0.39
SNX1-203ENST00000558040 VN1R2Q8NFZ6 395 aa17.51■□□□□ 0.39
SNX1-203ENST00000558040 ACTRT1Q8TDG2 376 aa17.51■□□□□ 0.39
SNX1-203ENST00000558040 RNF25Q96BH1 459 aaPredicted RBP17.51■□□□□ 0.39
SNX1-203ENST00000558040 ZNF707Q96C28 371 aaPredicted RBP17.51■□□□□ 0.39
SNX1-203ENST00000558040 ACSF2Q96CM8 615 aaPredicted RBP17.51■□□□□ 0.39
SNX1-203ENST00000558040 TKTL2Q9H0I9 626 aa17.51■□□□□ 0.39
SNX1-203ENST00000558040 TTYH1Q9H313 450 aaPredicted RBP17.51■□□□□ 0.39
SNX1-203ENST00000558040 DHX35Q9H5Z1 703 aaKnown RBP17.51■□□□□ 0.39
SNX1-203ENST00000558040 HCFC1R1Q9NWW0 138 aa17.51■□□□□ 0.39
SNX1-203ENST00000558040 ARHGEF38Q9NXL2 777 aa17.51■□□□□ 0.39
SNX1-203ENST00000558040 ZMYM5Q9UJ78 669 aa17.51■□□□□ 0.39
SNX1-203ENST00000558040 TTC7AQ9ULT0 858 aaPredicted RBP17.51■□□□□ 0.39
SNX1-203ENST00000558040 CLUHO75153 1309 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 TRAV19A0A0A6YYK7 116 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 A0A1W2PRU2 124 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 C2orf78A6NCI8 922 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 SOBPA7XYQ1 873 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 PI4K2BG5E9Z4 385 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 PTPN7P35236 360 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 GTF2F1P35269 517 aaKnown RBP eCLIP17.5■□□□□ 0.39
SNX1-203ENST00000558040 ZNF135P52742 658 aaPredicted RBP17.5■□□□□ 0.39
SNX1-203ENST00000558040 RBM10P98175 930 aaKnown RBP17.5■□□□□ 0.39
SNX1-203ENST00000558040 CYP4F8P98187 520 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 PPP2R5EQ16537 467 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 ZC3H12AQ5D1E8 599 aaKnown RBP17.5■□□□□ 0.39
SNX1-203ENST00000558040 TFDP3Q5H9I0 405 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 ACBD5Q5T8D3 534 aaPredicted RBP17.5■□□□□ 0.39
SNX1-203ENST00000558040 NUGGCQ68CJ6 796 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 SPOCD1Q6ZMY3 1216 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 GRASPQ7Z6J2 395 aaPredicted RBP17.5■□□□□ 0.39
SNX1-203ENST00000558040 UNC45BQ8IWX7 931 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 CEP112Q8N8E3 955 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 ATP6V0D2Q8N8Y2 350 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 MNS1Q8NEH6 495 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 MAIP1Q8WWC4 291 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 RAPGEF5Q92565 580 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 PLD4Q96BZ4 506 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 SLC39A13Q96H72 371 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 FCRL2Q96LA5 508 aaPredicted RBP17.5■□□□□ 0.39
SNX1-203ENST00000558040 HAPLN3Q96S86 360 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 CALN1Q9BXU9 219 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 GPATCH2LQ9NWQ4 482 aa17.5■□□□□ 0.39
SNX1-203ENST00000558040 ZNF487B1APH4 448 aa17.49■□□□□ 0.39
SNX1-203ENST00000558040 TNRC18O15417 2968 aaPredicted RBP17.49■□□□□ 0.39
SNX1-203ENST00000558040 OLFM2O95897 454 aa17.49■□□□□ 0.39
SNX1-203ENST00000558040 IGLV3-27P01718 113 aa17.49■□□□□ 0.39
SNX1-203ENST00000558040 FGGP02679 453 aa17.49■□□□□ 0.39
SNX1-203ENST00000558040 MBL2P11226 248 aaPredicted RBP17.49■□□□□ 0.39
SNX1-203ENST00000558040 HOXB8P17481 243 aaPredicted RBP17.49■□□□□ 0.39
SNX1-203ENST00000558040 HDCP19113 662 aa17.49■□□□□ 0.39
SNX1-203ENST00000558040 POU3F3P20264 500 aaPredicted RBP17.49■□□□□ 0.39
SNX1-203ENST00000558040 ARL4AP40617 200 aa17.49■□□□□ 0.39
SNX1-203ENST00000558040 ARSEP51690 589 aa17.49■□□□□ 0.39
SNX1-203ENST00000558040 GRIN2CQ14957 1233 aa17.49■□□□□ 0.39
SNX1-203ENST00000558040 LONRF2Q1L5Z9 754 aa17.49■□□□□ 0.39
SNX1-203ENST00000558040 TXNDC8Q6A555 127 aa17.49■□□□□ 0.39
SNX1-203ENST00000558040 ANKRD54Q6NXT1 300 aa17.49■□□□□ 0.39
SNX1-203ENST00000558040 MFSD7Q6UXD7 560 aa17.49■□□□□ 0.39
SNX1-203ENST00000558040 TMC5Q6UXY8 1006 aa17.49■□□□□ 0.39
SNX1-203ENST00000558040 SHKBP1Q8TBC3 707 aa17.49■□□□□ 0.39
SNX1-203ENST00000558040 FAM71BQ8TC56 605 aa17.49■□□□□ 0.39
SNX1-203ENST00000558040 MS4A14Q96JA4 679 aa17.49■□□□□ 0.39
SNX1-203ENST00000558040 ZNF670Q9BS34 389 aa17.49■□□□□ 0.39
SNX1-203ENST00000558040 OSBPL8Q9BZF1 889 aa17.49■□□□□ 0.39
SNX1-203ENST00000558040 PCDH18Q9HCL0 1135 aa17.49■□□□□ 0.39
SNX1-203ENST00000558040 RCOR3Q9P2K3 495 aaPredicted RBP17.49■□□□□ 0.39
SNX1-203ENST00000558040 EFR3BQ9Y2G0 817 aa17.49■□□□□ 0.39
SNX1-203ENST00000558040 MYO7AQ13402 2215 aa17.48■□□□□ 0.39
SNX1-203ENST00000558040 OBSL1O75147 1896 aa17.48■□□□□ 0.39
SNX1-203ENST00000558040 C3orf70A6NLC5 250 aaPredicted RBP17.48■□□□□ 0.39
SNX1-203ENST00000558040 KCNU1A8MYU2 1149 aa17.48■□□□□ 0.39
SNX1-203ENST00000558040 H3BRJ5 948 aa17.48■□□□□ 0.39
SNX1-203ENST00000558040 GLP2RO95838 553 aa17.48■□□□□ 0.39
SNX1-203ENST00000558040 CKMP06732 381 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms