RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 EPS8L1Q8TE68 723 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 DDX1Q92499 740 aaKnown RBP13.04□□□□□ -0.32
SLIRP-211ENST00000557623 SERPINB11Q96P15 392 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 PNKPQ96T60 521 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 POPDC2Q9HBU9 364 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 ASNSD1Q9NWL6 643 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 WDR35Q9P2L0 1181 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 SFMBT1Q9UHJ3 866 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 FBXO4Q9UKT5 387 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 FANCMQ8IYD8 2048 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 GOLGA8CPA6NN73 597 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 BHMG1C9JSJ3 638 aaPredicted RBP13.03□□□□□ -0.32
SLIRP-211ENST00000557623 H0Y858 1186 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 ATG13O75143 517 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 LATS1O95835 1130 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 EGFP01133 1207 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 KLKB1P03952 638 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 APODP05090 189 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 ZNF445P59923 1031 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 YWHAZP63104 245 aaKnown RBP13.03□□□□□ -0.32
SLIRP-211ENST00000557623 CDR2Q01850 454 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 RING1Q06587 406 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 MTAPQ13126 283 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 NNTQ13423 1086 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 GAB4Q2WGN9 574 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 TAF3Q5VWG9 929 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 NUGGCQ68CJ6 796 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 OR6B2Q6IFH4 312 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 TRIM72Q6ZMU5 477 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 TOGARAM2Q6ZUX3 1019 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 NUDT18Q6ZVK8 323 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 ERICH1Q86X53 443 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 TMEM25Q86YD3 366 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 DENND1CQ8IV53 801 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 UNC45BQ8IWX7 931 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 CPXM2Q8N436 756 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 SPEM1Q8N4L4 309 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 ATOH1Q92858 354 aaPredicted RBP13.03□□□□□ -0.32
SLIRP-211ENST00000557623 XPO6Q96QU8 1125 aaKnown RBP13.03□□□□□ -0.32
SLIRP-211ENST00000557623 BBS2Q9BXC9 721 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 RBM12Q9NTZ6 932 aaKnown RBP13.03□□□□□ -0.32
SLIRP-211ENST00000557623 MARK1Q9P0L2 795 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 AGO1Q9UL18 857 aaKnown RBP13.03□□□□□ -0.32
SLIRP-211ENST00000557623 MYO6Q9UM54 1294 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 CACNA1IQ9P0X4 2223 aa13.03□□□□□ -0.32
SLIRP-211ENST00000557623 HSF2BPO75031 334 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 CYBBP04839 570 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 FYNP06241 537 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 MMEP08473 750 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 FERP16591 822 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 GABRB2P47870 512 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 CXCL12P48061 93 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 TBX4P57082 545 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 FANCCQ00597 558 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 SLC6A3Q01959 620 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 NHLH1Q02575 133 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 NR1I3Q14994 352 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 ZNF528Q3MIS6 628 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 PTPN20Q4JDL3 420 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 LRSAM1Q6UWE0 723 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 TPGS1Q6ZTW0 290 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 FAM183BPQ6ZVS7 135 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 DQX1Q8TE96 717 aaKnown RBP13.02□□□□□ -0.33
SLIRP-211ENST00000557623 C18orf8Q96DM3 657 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 FAM122AQ96E09 287 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 NAP1L5Q96NT1 182 aaPredicted RBP13.02□□□□□ -0.33
SLIRP-211ENST00000557623 TSPY26PQ9H489 355 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 FBRSL1Q9HCM7 1045 aaKnown RBP13.02□□□□□ -0.33
SLIRP-211ENST00000557623 NPDC1Q9NQX5 325 aaPredicted RBP13.02□□□□□ -0.33
SLIRP-211ENST00000557623 PRMT8Q9NR22 394 aaPredicted RBP13.02□□□□□ -0.33
SLIRP-211ENST00000557623 DEC1Q9P2X7 70 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 TJP2Q9UDY2 1190 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 NOCTQ9UK39 431 aaKnown RBP13.02□□□□□ -0.33
SLIRP-211ENST00000557623 NAALADL1Q9UQQ1 740 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 TLR6Q9Y2C9 796 aa13.02□□□□□ -0.33
SLIRP-211ENST00000557623 A0A0A0MRY4 1105 aa13.01□□□□□ -0.33
SLIRP-211ENST00000557623 CHURC1-FNTBB4DL54 471 aa13.01□□□□□ -0.33
SLIRP-211ENST00000557623 NEDD8-MDP1E9PL57 170 aa13.01□□□□□ -0.33
SLIRP-211ENST00000557623 MSI1O43347 362 aaKnown RBP13.01□□□□□ -0.33
SLIRP-211ENST00000557623 CACNG3O60359 315 aa13.01□□□□□ -0.33
SLIRP-211ENST00000557623 KAT7O95251 611 aa13.01□□□□□ -0.33
SLIRP-211ENST00000557623 IGLV3-27P01718 113 aa13.01□□□□□ -0.33
SLIRP-211ENST00000557623 ERBB2P04626 1255 aa13.01□□□□□ -0.33
SLIRP-211ENST00000557623 SP9P0CG40 484 aa13.01□□□□□ -0.33
SLIRP-211ENST00000557623 TYRP14679 529 aa13.01□□□□□ -0.33
SLIRP-211ENST00000557623 GBP1P32455 592 aa13.01□□□□□ -0.33
SLIRP-211ENST00000557623 SCNN1AP37088 669 aa13.01□□□□□ -0.33
SLIRP-211ENST00000557623 GRIA2P42262 883 aa13.01□□□□□ -0.33
SLIRP-211ENST00000557623 SLC6A11P48066 632 aa13.01□□□□□ -0.33
SLIRP-211ENST00000557623 SLC11A2P49281 568 aa13.01□□□□□ -0.33
SLIRP-211ENST00000557623 UBASH3AP57075 661 aa13.01□□□□□ -0.33
SLIRP-211ENST00000557623 NOMO3P69849 1222 aa13.01□□□□□ -0.33
SLIRP-211ENST00000557623 CDK17Q00537 523 aa13.01□□□□□ -0.33
SLIRP-211ENST00000557623 CSTF1Q05048 431 aaKnown RBP13.01□□□□□ -0.33
SLIRP-211ENST00000557623 NAIF1Q69YI7 327 aaPredicted RBP13.01□□□□□ -0.33
SLIRP-211ENST00000557623 ZC3H14Q6PJT7 736 aaKnown RBP13.01□□□□□ -0.33
SLIRP-211ENST00000557623 OLFML1Q6UWY5 402 aa13.01□□□□□ -0.33
SLIRP-211ENST00000557623 Q6ZS52 159 aa13.01□□□□□ -0.33
SLIRP-211ENST00000557623 SLC26A9Q7LBE3 791 aa13.01□□□□□ -0.33
SLIRP-211ENST00000557623 ETFBKMTQ8IXQ9 262 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms