RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 SLC11A2P49281 568 aa13.01□□□□□ -0.33
SLIRP-209ENST00000557342 UBASH3AP57075 661 aa13.01□□□□□ -0.33
SLIRP-209ENST00000557342 NOMO3P69849 1222 aa13.01□□□□□ -0.33
SLIRP-209ENST00000557342 CDK17Q00537 523 aa13.01□□□□□ -0.33
SLIRP-209ENST00000557342 CSTF1Q05048 431 aaKnown RBP13.01□□□□□ -0.33
SLIRP-209ENST00000557342 NAIF1Q69YI7 327 aaPredicted RBP13.01□□□□□ -0.33
SLIRP-209ENST00000557342 ZC3H14Q6PJT7 736 aaKnown RBP13.01□□□□□ -0.33
SLIRP-209ENST00000557342 OLFML1Q6UWY5 402 aa13.01□□□□□ -0.33
SLIRP-209ENST00000557342 Q6ZS52 159 aa13.01□□□□□ -0.33
SLIRP-209ENST00000557342 SLC26A9Q7LBE3 791 aa13.01□□□□□ -0.33
SLIRP-209ENST00000557342 ETFBKMTQ8IXQ9 262 aa13.01□□□□□ -0.33
SLIRP-209ENST00000557342 FAM217AQ8IXS0 508 aa13.01□□□□□ -0.33
SLIRP-209ENST00000557342 NAT16Q8N8M0 369 aa13.01□□□□□ -0.33
SLIRP-209ENST00000557342 ZNF397Q8NF99 534 aaPredicted RBP13.01□□□□□ -0.33
SLIRP-209ENST00000557342 AZIN2Q96A70 460 aa13.01□□□□□ -0.33
SLIRP-209ENST00000557342 SLC2A13Q96QE2 648 aa13.01□□□□□ -0.33
SLIRP-209ENST00000557342 DDX50Q9BQ39 737 aaKnown RBP13.01□□□□□ -0.33
SLIRP-209ENST00000557342 NUP58Q9BVL2 599 aa13.01□□□□□ -0.33
SLIRP-209ENST00000557342 FAM126AQ9BYI3 521 aaPredicted RBP13.01□□□□□ -0.33
SLIRP-209ENST00000557342 IRX2Q9BZI1 471 aaPredicted RBP13.01□□□□□ -0.33
SLIRP-209ENST00000557342 EDEM3Q9BZQ6 932 aa13.01□□□□□ -0.33
SLIRP-209ENST00000557342 ARHGEF4Q9NR80 690 aa13.01□□□□□ -0.33
SLIRP-209ENST00000557342 TMEM51Q9NW97 253 aa13.01□□□□□ -0.33
SLIRP-209ENST00000557342 STOML2Q9UJZ1 356 aa13.01□□□□□ -0.33
SLIRP-209ENST00000557342 RNF40O75150 1001 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 TULP3O75386 442 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 DAB1O75553 588 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 PAPSS2O95340 614 aaPredicted RBP13□□□□□ -0.33
SLIRP-209ENST00000557342 TRUB2O95900 331 aaKnown RBP13□□□□□ -0.33
SLIRP-209ENST00000557342 CYP1A1P04798 512 aaPredicted RBP13□□□□□ -0.33
SLIRP-209ENST00000557342 TPM3P06753 285 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 PLA2G5P39877 138 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 TNFRSF4P43489 277 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 NRLP54845 237 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 MRPS21P82921 87 aaKnown RBP13□□□□□ -0.33
SLIRP-209ENST00000557342 FMO1Q01740 532 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 ARID5AQ03989 594 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 GAS6Q14393 721 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 MPPE1Q53F39 396 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 DCAF6Q58WW2 860 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 FIGNQ5HY92 759 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 ADGRF1Q5T601 910 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 SYPL2Q5VXT5 272 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 NAA35Q5VZE5 725 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 GRAMD4Q6IC98 578 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 TAC4Q86UU9 113 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 C12orf40Q86WS4 652 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 MAML2Q8IZL2 1156 aaPredicted RBP13□□□□□ -0.33
SLIRP-209ENST00000557342 DEFB106AQ8N104 65 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 SLC20A1Q8WUM9 679 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 CPA5Q8WXQ8 436 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 ACDQ96AP0 544 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 DNAJC17Q9NVM6 304 aaKnown RBP13□□□□□ -0.33
SLIRP-209ENST00000557342 RRN3Q9NYV6 651 aa13□□□□□ -0.33
SLIRP-209ENST00000557342 TBC1D3BA6NDS4 549 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 K7EQS6 105 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 IRAK2O43187 625 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 ACSL4O60488 711 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 PENKP01210 267 aaPredicted RBP12.99□□□□□ -0.33
SLIRP-209ENST00000557342 IGLV3-25P01717 112 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 APOEP02649 317 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 SLC2A3P11169 496 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 CHRNB2P17787 502 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 NOS2P35228 1153 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 SATB1Q01826 763 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 KDSRQ06136 332 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 MTA1Q13330 715 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 TAF5Q15542 800 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 HSF5Q4G112 596 aaPredicted RBP12.99□□□□□ -0.33
SLIRP-209ENST00000557342 FYB2Q5VWT5 728 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 XYLT1Q86Y38 959 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 TERB1Q8NA31 727 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 RPLP0P6Q8NHW5 317 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 KCNV2Q8TDN2 545 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 DDI1Q8WTU0 396 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 BAP1Q92560 729 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 EZH1Q92800 747 aaPredicted RBP12.99□□□□□ -0.33
SLIRP-209ENST00000557342 IQCDQ96DY2 449 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 SLC39A13Q96H72 371 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 PIWIL1Q96J94 861 aaKnown RBP12.99□□□□□ -0.33
SLIRP-209ENST00000557342 FCRL2Q96LA5 508 aaPredicted RBP12.99□□□□□ -0.33
SLIRP-209ENST00000557342 AGPAT1Q99943 283 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 SLC2A11Q9BYW1 496 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 FAM204AQ9H8W3 233 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.99□□□□□ -0.33
SLIRP-209ENST00000557342 SLC12A6Q9UHW9 1150 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 STAP1Q9ULZ2 295 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 SLC8A2Q9UPR5 921 aa12.99□□□□□ -0.33
SLIRP-209ENST00000557342 MYO18AQ92614 2054 aaKnown RBP12.98□□□□□ -0.33
SLIRP-209ENST00000557342 GRAP2O75791 330 aa12.98□□□□□ -0.33
SLIRP-209ENST00000557342 UNGP13051 313 aaPredicted RBP12.98□□□□□ -0.33
SLIRP-209ENST00000557342 MMP8P22894 467 aa12.98□□□□□ -0.33
SLIRP-209ENST00000557342 NBL1P41271 181 aa12.98□□□□□ -0.33
SLIRP-209ENST00000557342 MATKP42679 507 aa12.98□□□□□ -0.33
SLIRP-209ENST00000557342 NSFP46459 744 aaKnown RBP12.98□□□□□ -0.33
SLIRP-209ENST00000557342 DGKGP49619 791 aa12.98□□□□□ -0.33
SLIRP-209ENST00000557342 CENPCQ03188 943 aa12.98□□□□□ -0.33
SLIRP-209ENST00000557342 ASIC2Q16515 512 aa12.98□□□□□ -0.33
SLIRP-209ENST00000557342 FAM102AQ5T9C2 384 aaPredicted RBP12.98□□□□□ -0.33
SLIRP-209ENST00000557342 SFMBT2Q5VUG0 894 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms