RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 TEDDM1Q5T9Z0 273 aa11.77□□□□□ -0.53
SRP54-213ENST00000556994 MBLAC2Q68D91 279 aa11.77□□□□□ -0.53
SRP54-213ENST00000556994 JADE1Q6IE81 842 aa11.77□□□□□ -0.53
SRP54-213ENST00000556994 ISLR2Q6UXK2 745 aa11.77□□□□□ -0.53
SRP54-213ENST00000556994 MAVSQ7Z434 540 aa11.77□□□□□ -0.53
SRP54-213ENST00000556994 MAP7D3Q8IWC1 876 aa11.77□□□□□ -0.53
SRP54-213ENST00000556994 FAM172AQ8WUF8 416 aa11.77□□□□□ -0.53
SRP54-213ENST00000556994 C1orf21Q9H246 121 aa11.77□□□□□ -0.53
SRP54-213ENST00000556994 MINDY3Q9H8M7 445 aa11.77□□□□□ -0.53
SRP54-213ENST00000556994 RPF1Q9H9Y2 349 aaKnown RBP11.77□□□□□ -0.53
SRP54-213ENST00000556994 BTBD7Q9P203 1132 aa11.77□□□□□ -0.53
SRP54-213ENST00000556994 APOBEC2Q9Y235 224 aaKnown RBP11.77□□□□□ -0.53
SRP54-213ENST00000556994 BIRC5O15392 142 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 OPHN1O60890 802 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 SIN3BO75182 1162 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 FKBP6O75344 327 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 STK10O94804 968 aaKnown RBP11.76□□□□□ -0.53
SRP54-213ENST00000556994 F7P08709 466 aaPredicted RBP11.76□□□□□ -0.53
SRP54-213ENST00000556994 IQCF3P0C7M6 154 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 FGF3P11487 239 aaPredicted RBP11.76□□□□□ -0.53
SRP54-213ENST00000556994 PTPRAP18433 802 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 AOC1P19801 751 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 NCF2P19878 526 aaPredicted RBP11.76□□□□□ -0.53
SRP54-213ENST00000556994 AQP4P55087 323 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 CCNIQ14094 377 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 PPM1JQ5JR12 505 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 KYAT3Q6YP21 454 aaKnown RBP11.76□□□□□ -0.53
SRP54-213ENST00000556994 SCUBE3Q8IX30 993 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 OR6Y1Q8NGX8 325 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 JDP2Q8WYK2 163 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 PPP2R3CQ969Q6 453 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 RTP4Q96DX8 246 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 PGLYRP2Q96PD5 576 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 WRNIP1Q96S55 665 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 SNRNP25Q9BV90 132 aaKnown RBP11.76□□□□□ -0.53
SRP54-213ENST00000556994 GPAMQ9HCL2 828 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 PACSIN3Q9UKS6 424 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 PCDHA11Q9Y5I1 949 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 PARP14Q460N5 1801 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 BCLAF3A2AJT9 711 aaKnown RBP11.76□□□□□ -0.53
SRP54-213ENST00000556994 ANKRD33BA6NCL7 494 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 TPP1O14773 563 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 ALDOAP04075 364 aaKnown RBP11.76□□□□□ -0.53
SRP54-213ENST00000556994 PEX2P28328 305 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 ARRB2P32121 409 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 NDST1P52848 882 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 MSLNQ13421 630 aaPredicted RBP11.76□□□□□ -0.53
SRP54-213ENST00000556994 RABGAP1LQ5R372 815 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 IER5Q5VY09 327 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 BSPRYQ5W0U4 402 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 DHDDSQ86SQ9 333 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 PDSS2Q86YH6 399 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 HPS6Q86YV9 775 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 C10orf107Q8IVU9 208 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 RNF217Q8TC41 542 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 SPATA16Q9BXB7 569 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 FAM192AQ9GZU8 254 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 CDT1Q9H211 546 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 PTPRHQ9HD43 1115 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 ZNF358Q9NW07 568 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 MKS1Q9NXB0 559 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 TSPAN16Q9UKR8 245 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 ADAMTS5Q9UNA0 930 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 MFHAS1Q9Y4C4 1052 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 PSAT1Q9Y617 370 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 RLFQ13129 1914 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 TRIP11Q15643 1979 aa11.76□□□□□ -0.53
SRP54-213ENST00000556994 GPR25O00155 361 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 TGM2P21980 687 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 PROZP22891 400 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 ICAM3P32942 547 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 SERPINB6P35237 376 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 MAGEA3P43357 314 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 IDH3AP50213 366 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 COPAP53621 1224 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 DLG1Q12959 904 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 PDE1CQ14123 709 aaPredicted RBP11.75□□□□□ -0.53
SRP54-213ENST00000556994 TBCCQ15814 346 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 LIN52Q52LA3 116 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 ARCQ7LC44 396 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 GDPD5Q8WTR4 605 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 GORASP1Q9BQQ3 440 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 B3GNT5Q9BYG0 378 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 FRMD8Q9BZ67 464 aaPredicted RBP11.75□□□□□ -0.53
SRP54-213ENST00000556994 MAN1C1Q9NR34 630 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 PICK1Q9NRD5 415 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 DNAJB4Q9UDY4 337 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 KLHL33A6NCF5 533 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 SPDYE16A6NNV3 312 aaPredicted RBP11.75□□□□□ -0.53
SRP54-213ENST00000556994 TXNDC9O14530 226 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 ADCY6O43306 1168 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 PFKMP08237 780 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 CD1EP15812 388 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 CYP2F1P24903 491 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 GRIA2P42262 883 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 CDK7P50613 346 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 RPS6KA3P51812 740 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 OAZ1P54368 228 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 SESN2P58004 480 aaPredicted RBP11.75□□□□□ -0.53
SRP54-213ENST00000556994 TNFAIP1Q13829 316 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms